RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 NRLP54845 237 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 EVX2Q03828 476 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 TRAP1Q12931 704 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 VPS26BQ4G0F5 336 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 KBTBD8Q8NFY9 601 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 ZCCHC2Q9C0B9 1178 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 CD84Q9UIB8 345 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 RAB23Q9ULC3 237 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 KLF1Q13351 362 aaPredicted RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 RIPK1Q13546 671 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 C11orf24Q96F05 449 aaPredicted RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 B3GALT6Q96L58 329 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 ZDHHC15Q96MV8 337 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 PFDN2Q9UHV9 154 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 ASTN1O14525 1302 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 DPPA5A6NC42 116 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 MSI1O43347 362 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 SERPINA1P01009 418 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 FASTKD3Q14CZ7 662 aaKnown RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 RNF157Q96PX1 679 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 C11orf16Q9NQ32 467 aa16.82■□□□□ 0.28
TSPAN3-201ENST00000267970 PRODHO43272 600 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 PGK1P00558 417 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNHIT3Q15649 155 aaPredicted RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 P2RX7Q99572 595 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ABCC13Q9NSE7 274 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 B4GALT5O43286 388 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 CYP1A2P05177 515 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF460Q14592 562 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 MEA1Q16626 185 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 OR5B17Q8NGF7 314 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 TOP1MTQ969P6 601 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 CASZ1Q86V15 1759 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 FMO1Q01740 532 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 RBM23Q86U06 439 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ZDHHC17Q8IUH5 632 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 GAL3ST3Q96A11 431 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ELAC1Q9H777 363 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 TMEM39AQ9NV64 488 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 NPR3P17342 541 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 THOP1P52888 689 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 TGFB2P61812 414 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 FAAH2Q6GMR7 532 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 AZIN1O14977 448 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 SNAP91O60641 907 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 FCER2P06734 321 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 UQCRBP14927 111 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC6A2P23975 617 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 NAA20P61599 178 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 INTS11Q5TA45 600 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 AHSA2Q719I0 299 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 OR8H3Q8N146 312 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF615Q8N8J6 731 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 RP9Q8TA86 221 aaKnown RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 C18orf25Q96B23 403 aaPredicted RBP16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 CNPPD1Q9BV87 410 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 NMUR2Q9GZQ4 415 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 ELOVL4Q9GZR5 314 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 FBXL21Q9UKT6 434 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 COMMD3-BMI1R4GMX3 469 aa16.81■□□□□ 0.28
TSPAN3-201ENST00000267970 H3BSH0 61 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 PGRMC2O15173 223 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ROR2Q01974 943 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 SWI5Q1ZZU3 235 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 IRAK1BP1Q5VVH5 260 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ANKRD46Q86W74 232 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 SUSD6Q92537 303 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 CHCHD6Q9BRQ6 235 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 CDADC1Q9BWV3 514 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 OSBPL11Q9BXB4 747 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 DMTF1Q9Y222 760 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 RAP2CQ9Y3L5 183 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 NEXMIFQ5QGS0 1516 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ZW10O43264 779 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 NOS2P35228 1153 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 MANFP55145 182 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 GPR180Q86V85 440 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 LRTOMTQ8WZ04 291 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 IKZF2Q9UKS7 526 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 GNEQ9Y223 722 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 YDJCA8MPS7 323 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ARHGEF33A8MVX0 844 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 NOBOXO60393 691 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 DDNO94850 711 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 EIF4BP23588 611 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 SLC1A5Q15758 541 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 JOSD2Q8TAC2 188 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 EBPLQ9BY08 206 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 ZNF490Q9ULM2 529 aaPredicted RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 TCRBV7S2A1N4TA0A589 114 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 SUV39H1O43463 412 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 BMP6P22004 513 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 RHBDF2Q6PJF5 856 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 EIF1ADQ8N9N8 165 aaKnown RBP16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 Q96MT0 163 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
TSPAN3-201ENST00000267970 TNPO3Q9Y5L0 923 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms