RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 H0YHG0 523 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 K7ERQ8 282 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 MBTPS2O43462 519 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 TULP3O75386 442 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 GDI1P31150 447 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 CD151P48509 253 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 HTR4Q13639 388 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 RUNX3Q13761 415 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 TMEM215Q68D42 235 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 AHI1Q8N157 1196 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 CPA6Q8N4T0 437 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 EXOC2Q96KP1 924 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 TRMT61BQ9BVS5 477 aaKnown RBP22.68■■□□□ 1.22
CDX1-201ENST00000231656 NOD2Q9HC29 1040 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 GTSE1Q9NYZ3 720 aa22.68■■□□□ 1.22
CDX1-201ENST00000231656 ANKRD36A6QL64 1941 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 FAM95CA0A1B0GW59 222 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 ANHXE9PGG2 379 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 SERPINE1P05121 402 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 CPA3P15088 417 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 SKIV2L2P42285 1042 aaKnown RBP22.67■■□□□ 1.22
CDX1-201ENST00000231656 ACVR1Q04771 509 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 SLC20A2Q08357 652 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 GEN1Q17RS7 908 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 SPDYAQ5MJ70 313 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 DEFB123Q8N688 67 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 OR6Y1Q8NGX8 325 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 PPP1R14CQ8TAE6 165 aa22.67■■□□□ 1.22
CDX1-201ENST00000231656 RPL10LQ96L21 214 aaKnown RBP22.67■■□□□ 1.22
CDX1-201ENST00000231656 PHGDHO43175 533 aaKnown RBP22.66■■□□□ 1.22
CDX1-201ENST00000231656 SLC7A4O43246 635 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 SMAD6O43541 496 aaKnown RBP22.66■■□□□ 1.22
CDX1-201ENST00000231656 NDST3O95803 873 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 SLC35E2BP0CK96 405 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 ARSDP51689 593 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 GALNT3Q14435 633 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 LCA5Q86VQ0 697 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 CRLF3Q8IUI8 442 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 CALML6Q8TD86 181 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 MFSD1Q9H3U5 465 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 LHX3Q9UBR4 397 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 TLK1Q9UKI8 766 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 HS3ST2Q9Y278 367 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 SLC27A6Q9Y2P4 619 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 KCTD3Q9Y597 815 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 KIAA1549LQ6ZVL6 1849 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 G3V2L1 256 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 HAUS5O94927 633 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 MYL2P10916 166 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 SLC6A11P48066 632 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 STK19P49842 368 aaPredicted RBP22.66■■□□□ 1.22
CDX1-201ENST00000231656 SCNN1BP51168 640 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 SULT2A1Q06520 285 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 NSUN2Q08J23 767 aaKnown RBP eCLIP22.66■■□□□ 1.22
CDX1-201ENST00000231656 TAF1BQ53T94 588 aaPredicted RBP22.66■■□□□ 1.22
CDX1-201ENST00000231656 RAPH1Q70E73 1250 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 GALNT7Q86SF2 657 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 RNF135Q8IUD6 432 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 TTC8Q8TAM2 541 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 PEX13Q92968 403 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 NMRAL1Q9HBL8 299 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 KCNK4Q9NYG8 393 aa22.66■■□□□ 1.22
CDX1-201ENST00000231656 ARNTLO00327 626 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 AURKAO14965 403 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 INSIG1O15503 277 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 ITM2AO43736 263 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 POLR2EP19388 210 aaKnown RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 SAT1P21673 171 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 GRK2P25098 689 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 LEPRP48357 1165 aaKnown RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 PGGT1BP53609 377 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 RAB10P61026 200 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 RHOAP61586 193 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 ECT2LQ008S8 904 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 MESP2Q0VG99 397 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 LAMB3Q13751 1172 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 HSF5Q4G112 596 aaPredicted RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 CCDC91Q7Z6B0 441 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 METTL3Q86U44 580 aaKnown RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 MTDHQ86UE4 582 aaKnown RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 CEP97Q8IW35 865 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 HDAC10Q969S8 669 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 SKA1Q96BD8 255 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 SLC40A1Q9NP59 571 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 FBXO6Q9NRD1 293 aaPredicted RBP22.65■■□□□ 1.22
CDX1-201ENST00000231656 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.65■■□□□ 1.22
CDX1-201ENST00000231656 DEC1Q9P2X7 70 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 HEY2Q9UBP5 337 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 SLC25A13Q9UJS0 675 aa22.65■■□□□ 1.22
CDX1-201ENST00000231656 C2CD4DB7Z1M9 353 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 DNAJC6O75061 913 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 UNC5CO95185 931 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 RALBP11234 206 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 COL6A2P12110 1019 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 SRCP12931 536 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 CES1P23141 567 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 GJA4P35212 333 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 SLC1A6P48664 564 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 ZNF789Q5FWF6 425 aa22.64■■□□□ 1.22
CDX1-201ENST00000231656 FBXW10Q5XX13 1052 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms