RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SEMA3CQ99985 751 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 BOCQ9BWV1 1114 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 NRSN2Q9GZP1 204 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 POLR1EQ9GZS1 481 aaKnown RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 CLPBQ9H078 707 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 TCEAL2Q9H3H9 227 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 RBM22Q9NW64 420 aaKnown RBP eCLIP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 B4GALT6Q9UBX8 382 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 OR1A2Q9Y585 309 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 RAI2Q9Y5P3 530 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 DGKBQ9Y6T7 804 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 LRRD1A4D1F6 860 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 EME2A4GXA9 379 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 A8MX80 341 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 PSMD11O00231 422 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 PDE2AO00408 941 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 OPA1O60313 960 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 MT-CO3P00414 261 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 TNFP01375 233 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 PCCBP05166 539 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ANXA6P08133 673 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ALPIP09923 528 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CYP2A6P11509 494 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 MYF5P13349 255 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 KRT10P13645 584 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CTSEP14091 401 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ZFXP17010 805 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 KELP23276 732 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 MAGEA1P43355 309 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 RPIAP49247 311 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 KIAA1024LP59773 190 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 RPL26P61254 145 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CYP4F3Q08477 520 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ITKQ08881 620 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 C1orf61Q13536 156 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 RTP5Q14D33 572 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ACOX1Q15067 660 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 NR0B2Q15466 257 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CNGA3Q16281 694 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 C6orf132Q5T0Z8 1188 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CDCP2Q5VXM1 449 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 SLC9A4Q6AI14 798 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ESRP1Q6NXG1 681 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 PNCKQ6P2M8 343 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 USP45Q70EL2 814 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 NLRP8Q86W28 1048 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 HID1Q8IV36 788 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 RHOT1Q8IXI2 618 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CCDC13Q8IYE1 715 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 PLD5Q8N7P1 536 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CCNYQ8ND76 341 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ARRDC2Q8TBH0 407 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 MDM1Q8TC05 714 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 SCG3Q8WXD2 468 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 TMEM131Q92545 1883 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 TSACCQ96A04 125 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 FUBP1Q96AE4 644 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 WDR92Q96MX6 357 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 ZNF830Q96NB3 372 aaPredicted RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 LRRC61Q9BV99 259 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 TRPM6Q9BX84 2022 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 MAK16Q9BXY0 300 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 DDX56Q9NY93 547 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 RPL26L1Q9UNX3 145 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CLCA2Q9UQC9 943 aa10.54□□□□□ -0.72
CCDC9-203ENST00000596938 DSPP15924 2871 aaKnown RBP10.54□□□□□ -0.72
CCDC9-203ENST00000596938 CACNA1BQ00975 2339 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 TMEM202A6NGA9 273 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 NPIPB15A6NHN6 443 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 CACNB4O00305 520 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 MAP3K6O95382 1288 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 JCHAINP01591 159 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 PDHA1P08559 390 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 LHCGRP22888 699 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 TEAD1P28347 426 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 CLDN6P56747 220 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 IFI35P80217 286 aaPredicted RBP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 DPTQ07507 201 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 PPIDQ08752 370 aaKnown RBP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 IHHQ14623 411 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 PDK1Q15118 436 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 TAZQ16635 292 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 HSD11B1LQ7Z5J1 315 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 TECPR1Q7Z6L1 1165 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 RAVER1Q8IY67 606 aaKnown RBP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 OR56A4Q8NGH8 313 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 IFI44Q8TCB0 444 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 DTD2Q96FN9 168 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 MRFAP1L1Q96HT8 127 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 RBM15Q96T37 977 aaKnown RBP eCLIP10.53□□□□□ -0.72
CCDC9-203ENST00000596938 LGMNQ99538 433 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 ANP32EQ9BTT0 268 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 TEX101Q9BY14 249 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 BRD8Q9H0E9 1235 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 ABCG4Q9H172 646 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 WDR26Q9H7D7 661 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 KLQ9UEF7 1012 aa10.53□□□□□ -0.72
CCDC9-203ENST00000596938 A0A0A6YYK5 440 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms