RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 C1SP09871 688 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 ALPIP09923 528 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 GOLGA6DP0CG33 693 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 GIMD1P0DJR0 217 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 KRT10P13645 584 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 CTSEP14091 401 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 CES1P23141 567 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PEX5P50542 639 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 HADHBP55084 474 aaKnown RBP16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PPIDQ08752 370 aaKnown RBP16.67■□□□□ 0.26
SREBF1-219ENST00000580540 MTM1Q13496 603 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 NFATC4Q14934 902 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 AGERQ15109 404 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PDK1Q15118 436 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 CNGA3Q16281 694 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 USP45Q70EL2 814 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 DAAM2Q86T65 1068 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 CCDC50Q8IVM0 306 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 TPCN2Q8NHX9 752 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 FATE1Q969F0 183 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 APOLD1Q96LR9 279 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 SMIM14Q96QK8 99 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 IL12RB2Q99665 862 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 DUSP23Q9BVJ7 150 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 CEP41Q9BYV8 373 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 GOLGA6AQ9NYA3 693 aa16.67■□□□□ 0.26
SREBF1-219ENST00000580540 PNMA8BQ9ULN7 279 aaPredicted RBP16.67■□□□□ 0.26
SREBF1-219ENST00000580540 A0A0U1RQS6 177 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 NPIPB15A6NHN6 443 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-219ENST00000580540 CACNB4O00305 520 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-219ENST00000580540 JUPP14923 745 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 GM2AP17900 193 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 NIPAL4Q0D2K0 466 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 TFDP2Q14188 446 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 RAD9BQ6WBX8 426 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 HSD11B1LQ7Z5J1 315 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 TSPAN33Q86UF1 283 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 VSIG1Q86XK7 387 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 ACRBPQ8NEB7 543 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 ATL2Q8NHH9 583 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 ARRDC2Q8TBH0 407 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 PIH1D2Q8WWB5 315 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 NUS1Q96E22 293 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 SCRN2Q96FV2 425 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 WDR92Q96MX6 357 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 TMEM121BQ9BXQ6 578 aaPredicted RBP16.66■□□□□ 0.26
SREBF1-219ENST00000580540 KLQ9UEF7 1012 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 AMACRQ9UHK6 382 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 MOSPD1Q9UJG1 213 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 DOLKQ9UPQ8 538 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 CSNK1G3Q9Y6M4 447 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 PTPRBP23467 1997 aa16.66■□□□□ 0.26
SREBF1-219ENST00000580540 A0A0A6YYK5 440 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 RCCD1A6NED2 376 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 PPP1R12AO14974 1030 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 CST8O60676 142 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 GCATO75600 419 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ZRANB2O95218 330 aaKnown RBP eCLIP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 RASGRP1O95267 797 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ANXA6P08133 673 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 CDK4P11802 303 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 TSHRP16473 764 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 CA4P22748 312 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 LHCGRP22888 699 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ACP1P24666 158 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 HNF1BP35680 557 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ETV3P41162 512 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 CD86P42081 329 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 CDKN2BP42772 138 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 BLKP51451 505 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SRP54P61011 504 aaKnown RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 IHHQ14623 411 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SMAD1Q15797 465 aaKnown RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ALG11Q2TAA5 492 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 PNCKQ6P2M8 343 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SPOCD1Q6ZMY3 1216 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 NYAP1Q6ZVC0 841 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 KIAA1328Q86T90 577 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 LPCAT1Q8NF37 534 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 ZCCHC14Q8WYQ9 949 aaKnown RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SPOCK2Q92563 424 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 COQ10AQ96MF6 247 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 AGAP3Q96P47 875 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 BAG1Q99933 345 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 LRRC61Q9BV99 259 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 EVA1BQ9NVM1 165 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SAE1Q9UBE0 346 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SALL4Q9UJQ4 1053 aa16.65■□□□□ 0.26
SREBF1-219ENST00000580540 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.65■□□□□ 0.26
SREBF1-219ENST00000580540 AKAP13Q12802 2813 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CPED1A4D0V7 1026 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 FZD6O60353 706 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 TNFP01375 233 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CELA2BP08218 269 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CKMT1AP12532 417 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 MARCKSL1P49006 195 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 DUSP3P51452 185 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 HK3P52790 923 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms