RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 GTF2IRD1Q9UHL9 959 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TRHDEQ9UKU6 1024 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SORCS3Q9UPU3 1222 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PCDHB12Q9Y5F1 795 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SIP14410 1827 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ZCWPW2A0A1B0GU75 182 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 EME2A4GXA9 379 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 MAGEA13PA6NCF6 341 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ALG1L2C9J202 215 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 LIN7AO14910 233 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 DEAF1O75398 565 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 MT-CO1P00395 513 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SNRPBP14678 240 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 RAG1P15918 1043 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PLK1P53350 603 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 COG7P83436 770 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PPIDQ08752 370 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 ART3Q13508 389 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SLBPQ14493 270 aaKnown RBP eCLIP5.4□□□□□ -1.54
VAPA-203ENST00000577539 CNGA3Q16281 694 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ANO4Q32M45 955 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ARL13AQ5H913 290 aaPredicted RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 FAM91A1Q658Y4 838 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TMEM198Q66K66 360 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SEL1L3Q68CR1 1132 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ESRP1Q6NXG1 681 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 CXCL17Q6UXB2 119 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ATG14Q6ZNE5 492 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 PNPLA1Q8N8W4 532 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ZMIZ2Q8NF64 920 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SCAMP5Q8TAC9 235 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 KCTD13Q8WZ19 329 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 EXT2Q93063 718 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TMA16Q96EY4 203 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 SMARCD1Q96GM5 515 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 TEKT5Q96M29 485 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SLC2A13Q96QE2 648 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ECSITQ9BQ95 431 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 SIKE1Q9BRV8 207 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 S100A14Q9HCY8 104 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 WDR6Q9NNW5 1121 aaKnown RBP5.4□□□□□ -1.54
VAPA-203ENST00000577539 RBM22Q9NW64 420 aaKnown RBP eCLIP5.4□□□□□ -1.54
VAPA-203ENST00000577539 CDH22Q9UJ99 828 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ADAM28Q9UKQ2 775 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ACOT9Q9Y305 439 aa5.4□□□□□ -1.54
VAPA-203ENST00000577539 ANK1P16157 1881 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 MBLAC1A4D2B0 266 aaPredicted RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 ZBTB14O43829 449 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 RASGRP1O95267 797 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 ATP5BP06576 529 aaKnown RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 ITGAXP20702 1163 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 GRIK1P39086 918 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 CHRNA4P43681 627 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 CDC16Q13042 620 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 PIN1Q13526 163 aaPredicted RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 PCBP1Q15365 356 aaKnown RBP eCLIP5.4□□□□□ -1.55
VAPA-203ENST00000577539 FSCN1Q16658 493 aaKnown RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 TIGD5Q53EQ6 642 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 PPM1LQ5SGD2 360 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 STXBP5Q5T5C0 1151 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 THEMIS2Q5TEJ8 643 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 ZNF470Q6ECI4 717 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 TXNDC11Q6PKC3 985 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 DHDDSQ86SQ9 333 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 TMEM135Q86UB9 458 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 MYLK4Q86YV6 388 aaPredicted RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 RYBPQ8N488 228 aaPredicted RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 DQX1Q8TE96 717 aaKnown RBP5.4□□□□□ -1.55
VAPA-203ENST00000577539 GDPD5Q8WTR4 605 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 FTHL17Q9BXU8 183 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 KLHL25Q9H0H3 589 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 DNAJC28Q9NX36 388 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 MPP6Q9NZW5 540 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 XPR1Q9UBH6 696 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 MAPRE3Q9UPY8 281 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 POMPQ9Y244 141 aa5.4□□□□□ -1.55
VAPA-203ENST00000577539 MAGEB16A2A368 324 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 ERI2A8K979 691 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 PLD2O14939 933 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 DDHD2O94830 711 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CELF2O95319 508 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 PRKCGP05129 697 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 MYL4P12829 197 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 STMN1P16949 149 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PIK3R1P27986 724 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CPOXP36551 454 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 HARS2P49590 506 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 CSE1LP55060 971 aaKnown RBP5.39□□□□□ -1.55
VAPA-203ENST00000577539 MED21Q13503 144 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TUBB3Q13509 450 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CSHL1Q14406 222 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 GEN1Q17RS7 908 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 FAM110CQ1W6H9 321 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 MMEL1Q495T6 779 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 SDHAF4Q5VUM1 108 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TFAP2DQ7Z6R9 452 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 CNTD1Q8N815 330 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 C2orf69Q8N8R5 385 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 TEX19Q8NA77 164 aa5.39□□□□□ -1.55
VAPA-203ENST00000577539 PPHLN1Q8NEY8 458 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms