RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 DNAJC16Q9Y2G8 782 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 VWA7Q9Y334 891 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 PER2O15055 1255 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 FZD6O60353 706 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 HOXA9P31269 272 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 CDKN2DP55273 166 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 ABCE1P61221 599 aaKnown RBP16.89■□□□□ 0.29
SREK1-212ENST00000522912 RALGPS1Q5JS13 557 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 TMEM25Q86YD3 366 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 EFHBQ8N7U6 833 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 HEXDCQ8WVB3 486 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 PPM1EQ8WY54 764 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 MTIF3Q9H2K0 278 aaKnown RBP16.89■□□□□ 0.29
SREK1-212ENST00000522912 IGSF5Q9NSI5 407 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 CATSPERZQ9NTU4 200 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 OXSMQ9NWU1 459 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 CRYL1Q9Y2S2 319 aa16.89■□□□□ 0.29
SREK1-212ENST00000522912 A0A0U1RQS6 177 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 TRIM13O60858 407 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 PRAMEF12O95522 483 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 SLC4A1P02730 911 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 CYBBP04839 570 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 RB1P06400 928 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 SERPINB3P29508 390 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 PLK1P53350 603 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 ARHGAP15Q53QZ3 475 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 PRSS36Q5K4E3 855 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 MRNIPQ6NTE8 343 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 ZNF549Q6P9A3 640 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 CCDC91Q7Z6B0 441 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 TTC30BQ8N4P2 665 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 OR6K2Q8NGY2 324 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 RDH11Q8TC12 318 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 SKA1Q96BD8 255 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 ABCB8Q9NUT2 735 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 TDP1Q9NUW8 608 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 XPR1Q9UBH6 696 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 EVLQ9UI08 416 aaPredicted RBP16.88■□□□□ 0.29
SREK1-212ENST00000522912 ZFP69BQ9UJL9 534 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 PCDHB9Q9Y5E1 797 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 HCFC2Q9Y5Z7 792 aa16.88■□□□□ 0.29
SREK1-212ENST00000522912 C2orf81A6NN90 581 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 ZNF821O75541 412 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 WISP3O95389 354 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 HNRNPA1P09651 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
SREK1-212ENST00000522912 BMP1P13497 986 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 OGNP20774 298 aaKnown RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 LPOP22079 712 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 HLA-FP30511 346 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 CTSOP43234 321 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 AQP5P55064 265 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 AP1S1P61966 158 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 ASTLQ6HA08 431 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 CLNKQ7Z7G1 428 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 CAMK1DQ8IU85 385 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 PRR11Q96HE9 360 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 ZSWIM3Q96MP5 696 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 GATA5Q9BWX5 397 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 PNPOQ9NVS9 261 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 MID2Q9UJV3 735 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 TRIM33Q9UPN9 1127 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 MTF2Q9Y483 593 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 H0YHG0 523 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 T-ENOLP0DO92 83 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 STC1P52823 247 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 TIAL1Q01085 375 aaKnown RBP eCLIP16.87■□□□□ 0.296e-7■■■■■ 31.3
SREK1-212ENST00000522912 CSHL1Q14406 222 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 CTC1Q2NKJ3 1217 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 TYSND1Q2T9J0 566 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 TSNAXIP1Q2TAA8 658 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 PITRM1Q5JRX3 1037 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 DGKKQ5KSL6 1271 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 GRASPQ7Z6J2 395 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 TBC1D1Q86TI0 1168 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 PIWIL2Q8TC59 973 aaKnown RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 MOCOSQ96EN8 888 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 TSPAN17Q96FV3 270 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 LINC00597Q9H2U6 94 aa16.87■□□□□ 0.29
SREK1-212ENST00000522912 POLR3BQ9NW08 1133 aaPredicted RBP16.87■□□□□ 0.29
SREK1-212ENST00000522912 DLX3O60479 287 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 XYLBO75191 536 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 UNC5CO95185 931 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 PGLSO95336 258 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 CA3P07451 260 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 GKP32189 559 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ZNF77Q15935 545 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 AFTPHQ6ULP2 937 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 TMEM207Q6UWW9 146 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ALYREFQ86V81 257 aaKnown RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 TTC8Q8TAM2 541 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ANKRD49Q8WVL7 239 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 PIH1D2Q8WWB5 315 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ZNF707Q96C28 371 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 RPL10LQ96L21 214 aaKnown RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 LBHD1Q9BQE6 289 aaPredicted RBP16.86■□□□□ 0.29
SREK1-212ENST00000522912 TNKS2Q9H2K2 1166 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 GPAMQ9HCL2 828 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 BPIFA1Q9NP55 256 aa16.86■□□□□ 0.29
SREK1-212ENST00000522912 ACSS2Q9NR19 701 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms