RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 RHOQP17081 205 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 GJA1P17302 382 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 PAX3P23760 479 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CLDN10P78369 228 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SEMG2Q02383 582 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 KLF1Q13351 362 aaPredicted RBP11.35□□□□□ -0.59
SMPD4-218ENST00000482171 KRT72Q14CN4 511 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 C11orf96Q7Z7L8 435 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 OR4K2Q8NGD2 314 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 TEKT5Q96M29 485 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 SLC9A7Q96T83 725 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 KIF17Q9P2E2 1029 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 CDK5RAP2Q96SN8 1893 aa11.35□□□□□ -0.59
SMPD4-218ENST00000482171 A0A1W2PQ45 241 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 A0A1W2PQY0 241 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CCL16O15467 120 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 SERPINA4P29622 427 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 HALP42357 657 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 KCNQ1P51787 676 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 NAB1Q13506 487 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CST9Q5W186 159 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 UTS2BQ765I0 119 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 GPRIN1Q7Z2K8 1008 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 METTL6Q8TCB7 284 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 TRPC4APQ8TEL6 797 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 PHF12Q96QT6 1004 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 SYT11Q9BT88 431 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CXCL16Q9H2A7 254 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 OSGEPL1Q9H4B0 414 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 ZFP37Q9Y6Q3 630 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 FAM72CH0Y354 149 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 INPP4BO15327 924 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 H2AFYO75367 372 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 TRMUO75648 421 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 PCDH8O95206 1070 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CXCR3P49682 368 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 STARD3Q14849 445 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 MARCH8Q5T0T0 291 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 C6orf52Q5T4I8 152 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 UBAP2Q5T6F2 1119 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 VWA5B1Q5TIE3 1220 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 FAM72AQ5TYM5 149 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 FAM72DQ6L9T8 149 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 FAM72BQ86X60 149 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 SLC22A9Q8IVM8 553 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 RTL3Q8N8U3 475 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 RCN3Q96D15 328 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 MRPS26Q9BYN8 205 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 RHOJQ9H4E5 214 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 WDR55Q9H6Y2 383 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 SSU72Q9NP77 194 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 MRGBPQ9NV56 204 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 KLHL33A6NCF5 533 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 BPGMP07738 259 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 MLNP12872 115 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 RPL14P50914 215 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CCR3P51677 355 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 GPX6P59796 221 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 WASHC5Q12768 1159 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 FAM151BQ6UXP7 276 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 DHFR2Q86XF0 187 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 LRRC49Q8IUZ0 686 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 CCDC103Q8IW40 242 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 MIER2Q8N344 545 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 GLMNQ92990 594 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 RPL10LQ96L21 214 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 NPY6RQ99463 290 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 UNC93B1Q9H1C4 597 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 VRTNQ9H8Y1 702 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 PLGRKTQ9HBL7 147 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 PPM1HQ9ULR3 514 aa11.34□□□□□ -0.59
SMPD4-218ENST00000482171 GNEQ9Y223 722 aaKnown RBP11.34□□□□□ -0.59
SMPD4-218ENST00000482171 ACSL4O60488 711 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 XYLBO75191 536 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 FASP25445 335 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 PFKPQ01813 784 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CCDC149Q6ZUS6 474 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CROCCP3Q8IVE0 287 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 EVLQ9UI08 416 aaPredicted RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 TDRKHQ9Y2W6 561 aaKnown RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 VWA7Q9Y334 891 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 HBS1LQ9Y450 684 aaKnown RBP11.33□□□□□ -0.6
SMPD4-218ENST00000482171 SLCO1B7G3V0H7 640 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 TK2O00142 265 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 MATN3O15232 486 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 CCNCP24863 283 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 SLC11A1P49279 550 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 IL2P60568 153 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 GNA12Q03113 381 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 PERM1Q5SV97 790 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 FSTL4Q6MZW2 842 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 IGDCC3Q8IVU1 814 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 TP53INP2Q8IXH6 220 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 KBTBD2Q8IY47 623 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 NXNL1Q96CM4 212 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 FAR2Q96K12 515 aa11.33□□□□□ -0.6
SMPD4-218ENST00000482171 RMI1Q9H9A7 625 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 499 ms