RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
NPHP4-207ENST00000470763 MEAF6Q9HAF1 191 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 HMG20AQ9NP66 347 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 MYOZ2Q9NPC6 264 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 CHST12Q9NRB3 414 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 MAP10Q9P2G4 905 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ABT1Q9ULW3 272 aaKnown RBP13.8□□□□□ -0.2
NPHP4-207ENST00000470763 AQP12BA6NM10 295 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 SPATA31C2B4DYI2 1134 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 VWA5AO00534 786 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 MAN1A2O60476 641 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 NPHS1O60500 1241 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 CELF2O95319 508 aaKnown RBP13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ATP6V0D1P61421 351 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 PITX1P78337 314 aaPredicted RBP13.8□□□□□ -0.2
NPHP4-207ENST00000470763 IMPG1Q17R60 797 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 PYCR3Q53H96 274 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 IQSEC1Q6DN90 963 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ITIH5Q86UX2 942 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 AQP12AQ8IXF9 295 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ZUFSPQ96AP4 578 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 NRBF2Q96F24 287 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 PCYT2Q99447 389 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 IL12RB2Q99665 862 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 VTA1Q9NP79 307 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 CMTM6Q9NX76 183 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 ERVK-11Q9UQG0 969 aa13.8□□□□□ -0.2
NPHP4-207ENST00000470763 COL2A1P02458 1487 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ZBTB24O43167 697 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 HCRTO43612 131 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ALBP02768 609 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ALDOCP09972 364 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 GLUD2P49448 558 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CSHL1Q14406 222 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 DEFB115Q30KQ5 88 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 GTF2IRD2BQ6EKJ0 949 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 GTF2IRD2Q86UP8 949 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 TRPV3Q8NET8 790 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CDHR1Q96JP9 859 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CGREF1Q99674 301 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 NIFKQ9BYG3 293 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 PIF1Q9H611 641 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ATP13A3Q9H7F0 1226 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 SCHIP1Q9P0W5 487 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 PTGDR2Q9Y5Y4 395 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 A0A0J9YYE9 177 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 GFAPP14136 432 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 STMN1P16949 149 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 PTPN3P26045 913 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ALDH4A1P30038 563 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CSRP3P50461 194 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 RAB10P61026 200 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 STX1BP61266 288 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 AGAP7PQ5VUJ5 663 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 USP51Q70EK9 711 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 SLC26A9Q7LBE3 791 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 R3HCC1LQ7Z5L2 792 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ANKRD13BQ86YJ7 626 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ZNF280CQ8ND82 737 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 RNF139Q8WU17 664 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 C3orf30Q96M34 536 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CTRCQ99895 268 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 MTRRQ9UBK8 725 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 MAGED1Q9Y5V3 778 aaPredicted RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 FAM95CA0A1B0GW59 222 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 AURKAO14965 403 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 RFC2P35250 354 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 LSM3P62310 102 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ADARB1P78563 741 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 TARBP2Q15633 366 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 FAM83EQ2M2I3 478 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 SLCO6A1Q86UG4 719 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 PARP8Q8N3A8 854 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 STON2Q8WXE9 905 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 ELMO2Q96JJ3 720 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CNDP2Q96KP4 475 aaKnown RBP13.79□□□□□ -0.2
NPHP4-207ENST00000470763 MINDY3Q9H8M7 445 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CYP3A43Q9HB55 503 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 LRRC4Q9HBW1 653 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 CASS4Q9NQ75 786 aa13.79□□□□□ -0.2
NPHP4-207ENST00000470763 MSI1O43347 362 aaKnown RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 MAFO75444 373 aaPredicted RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 CAPN3P20807 821 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 TGM1P22735 817 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 BDNFP23560 247 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 HTR1BP28222 390 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 FRG1Q14331 258 aaKnown RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 MAPRE1Q15691 268 aaKnown RBP13.78□□□□□ -0.2
NPHP4-207ENST00000470763 PNPLA1Q8N8W4 532 aa13.78□□□□□ -0.2
NPHP4-207ENST00000470763 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms