RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 ERAP2Q6P179 960 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 KIAA1324Q6UXG2 1013 aaKnown RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 DPPA4Q7L190 304 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 LYSMD3Q7Z3D4 306 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TTC7BQ86TV6 843 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TSPAN33Q86UF1 283 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SPEM1Q8N4L4 309 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TTC30BQ8N4P2 665 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 BRSK1Q8TDC3 778 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 PYROXD1Q8WU10 500 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 PTCD2Q8WV60 388 aaKnown RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 HMGB4Q8WW32 186 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SIPA1Q96FS4 1042 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 HHIPQ96QV1 700 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SRPK1Q96SB4 655 aaKnown RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 IER2Q9BTL4 223 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 KIFC1Q9BW19 673 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 MRM3Q9HC36 420 aaKnown RBP11.88□□□□□ -0.51
RNF13-208ENST00000467996 CHRAC1Q9NRG0 131 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 NINJ2Q9NZG7 142 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 DLGAP2Q9P1A6 1054 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 SCML1Q9UN30 329 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ITM2BQ9Y287 266 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 ARL5AQ9Y689 179 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 TRIOO75962 3097 aa11.88□□□□□ -0.51
RNF13-208ENST00000467996 C1orf232A0A0U1RR37 186 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 TMEM221A6NGB7 291 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 MROH6A6NGR9 719 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 A8MX80 341 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 M0R296 226 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 LDB2O43679 373 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 RNASEH2AO75792 299 aaKnown RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 CRTAMO95727 393 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 CYP2A6P11509 494 aaPredicted RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 AOC1P19801 751 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 NMBRP28336 390 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 MAGEA9P43362 315 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 SUOXP51687 545 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 ZNF140P52738 457 aaPredicted RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 PMS2P54278 862 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 FAM193AP78312 1265 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 ELP6Q0PNE2 266 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 RALGDSQ12967 914 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 MTAPQ13126 283 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 LAMB3Q13751 1172 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 TSTD2Q5T7W7 516 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 LRRC66Q68CR7 880 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 FBXO38Q6PIJ6 1188 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 CAPN12Q6ZSI9 719 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 CCNJLQ8IV13 435 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 HDDC3Q8N4P3 179 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 TSTD1Q8NFU3 115 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 HNRNPLLQ8WVV9 542 aaKnown RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 RAB7BQ96AH8 199 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 FAM131CQ96AQ9 280 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 ZNF669Q96BR6 464 aaPredicted RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 CFAP36Q96G28 342 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 ZNF778Q96MU6 729 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 OMDQ99983 421 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 NAT9Q9BTE0 207 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 SEMA4AQ9H3S1 761 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 TRABDQ9H4I3 376 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 PLAC1Q9HBJ0 212 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 CD93Q9NPY3 652 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 ARGLU1Q9NWB6 273 aaPredicted RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 FBXL12Q9NXK8 326 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 BCCIPQ9P287 314 aaKnown RBP eCLIP11.87□□□□□ -0.51
RNF13-208ENST00000467996 ZC3H7BQ9UGR2 993 aaKnown RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 KCTD3Q9Y597 815 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.87□□□□□ -0.51
RNF13-208ENST00000467996 PLXNB3Q9ULL4 1909 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 KMT2EQ8IZD2 1858 aa11.87□□□□□ -0.51
RNF13-208ENST00000467996 FAM237BA0A1B0GVD1 139 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 MAGEB16A2A368 324 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 AREL1O15033 823 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 PI15O43692 258 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 BUD23O43709 281 aaKnown RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 USP1O94782 785 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 CLDN7O95471 211 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 C1SP09871 688 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ACADMP11310 421 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ZNF30P17039 623 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 SSTR1P30872 391 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 TAS2R38P59533 333 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 GPX6P59796 221 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ARHGEF7Q14155 803 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 CRYMQ14894 314 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 CNGA3Q16281 694 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 KYNUQ16719 465 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 STEAP4Q687X5 459 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ANO7Q6IWH7 933 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 CES3Q6UWW8 571 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 UNC5AQ6ZN44 842 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 USP30Q70CQ3 517 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 TRMT10CQ7L0Y3 403 aaKnown RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 NLRP9Q7RTR0 991 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms