RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PPM1JQ5JR12 505 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 DNAJC14Q6Y2X3 702 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CIR1Q86X95 450 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 BBS7Q8IWZ6 715 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF786Q8N393 782 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 OR6Y1Q8NGX8 325 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SMG7Q92540 1137 aaKnown RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TEKT2Q9UIF3 430 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 RPL26L1Q9UNX3 145 aaKnown RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TRAF6Q9Y4K3 522 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 PCDHGC4Q9Y5F7 938 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 C8AP07357 584 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SYT12Q8IV01 421 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TMEM132CQ8N3T6 1108 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 BRSK1Q8TDC3 778 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TRIB2Q92519 343 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 UBE2E3Q969T4 207 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 OTULINQ96BN8 352 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TCF12Q99081 682 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SEPHS2Q99611 448 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 IMPAD1Q9NX62 359 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CNTN6Q9UQ52 1028 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CCL16O15467 120 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 TBX18O95935 607 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 UGT2B4P06133 528 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CXCR3P49682 368 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SLC20A2Q08357 652 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 VAC14Q08AM6 782 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 KIAA0930Q6ICG6 404 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-203ENST00000467558 LRRC74BQ6ZQY2 392 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 NAT16Q8N8M0 369 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 OR8D1Q8WZ84 308 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 NXNL1Q96CM4 212 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 SMOC2Q9H3U7 446 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 CRTAC1Q9NQ79 661 aa13.82□□□□□ -0.2
BRAT1-203ENST00000467558 GLI3P10071 1580 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 MYO5AQ9Y4I1 1855 aaKnown RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 PSMG1O95456 288 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ELFN1P0C7U0 828 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF865P0CJ78 1059 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CCT8P50990 548 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 MPP1Q00013 466 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CSTF3Q12996 717 aaKnown RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 PRKG2Q13237 762 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CLNKQ7Z7G1 428 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 N4BP2Q86UW6 1770 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 BANPQ8N9N5 519 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 KREMEN2Q8NCW0 462 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 FIG4Q92562 907 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 B3GALT6Q96L58 329 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 NDUFA13Q9P0J0 144 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 MAPRE3Q9UPY8 281 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 LRCH1Q9Y2L9 728 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 GLYATL1P3A0A0U1RQE8 302 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 A0A1W2PQ45 241 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 A0A1W2PQY0 241 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 EDIL3O43854 480 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 SLC25A14O95258 325 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 LDLRP01130 860 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CREB1P16220 341 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 PROZP22891 400 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 SERPINB10P48595 397 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 NCALDP61601 193 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 GPR17Q13304 367 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 RFTN1Q14699 578 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 MTSS1LQ765P7 747 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ALYREFQ86V81 257 aaKnown RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 MAGEB10Q96LZ2 347 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 TMCC3Q9ULS5 477 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 SCML2Q9UQR0 700 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 PTPN2P17706 415 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ALDH9A1P49189 494 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 NRLP54845 237 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ADRM1Q16186 407 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 C16orf87Q6PH81 154 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 NET1Q7Z628 596 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CUZD1Q86UP6 607 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CHPFQ8IZ52 775 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 CACNA1SQ13698 1873 aa13.81□□□□□ -0.2
BRAT1-203ENST00000467558 ABHD14A-ACY1A0A1B0GW23 586 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF487B1APH4 448 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 GPR32O75388 356 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 SP100P23497 879 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 THOP1P52888 689 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 UBAP2LQ14157 1087 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 PAFAH1B3Q15102 231 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF697Q5TEC3 545 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 METTL21CQ5VZV1 264 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 APLFQ8IW19 511 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 MARK4Q96L34 752 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 C12orf65Q9H3J6 166 aaKnown RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 LEF1Q9UJU2 399 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 MTF2Q9Y483 593 aaPredicted RBP13.8□□□□□ -0.2
BRAT1-203ENST00000467558 PPP2R1BP30154 601 aa13.8□□□□□ -0.2
BRAT1-203ENST00000467558 TRAF2Q12933 501 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms