RNA–Protein interactions for RNA: ENST00000450932.2

SLF1-202, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 1 (best)

Gene SLF1, Length 2,318 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-202ENST00000450932 ERLIN2O94905 339 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 HAUS5O94927 633 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 DDAH2O95865 285 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 POMCP01189 267 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SPATA31D3P0C874 917 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FDXRP22570 491 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 BDNFP23560 247 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 MST1P26927 711 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 HOXA11P31270 313 aaPredicted RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 ATICP31939 592 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PTDSS1P48651 473 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 DRP2Q13474 957 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 DCAF6Q58WW2 860 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SLC27A1Q6PCB7 646 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FBXO38Q6PIJ6 1188 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SPATA31D4Q6ZUB0 917 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 CCDC28AQ8IWP9 274 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SLC34A3Q8N130 599 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PSPC1Q8WXF1 523 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 ING5Q8WYH8 240 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ZBTB45Q96K62 511 aaPredicted RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 SLC46A1Q96NT5 459 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 MEGF9Q9H1U4 602 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 C12orf65Q9H3J6 166 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 NELFAQ9H3P2 528 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 JKAMPQ9P055 326 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 F5P12259 2224 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ATG2BQ96BY7 2078 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 UNC79Q9P2D8 2635 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SLC38A8A6NNN8 435 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FCHO1O14526 889 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PCDH17O14917 1159 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 SUV39H1O43463 412 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 CFIP05156 583 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 THP07101 528 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 HGFP14210 728 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 BTKQ06187 659 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 MRPL49Q13405 166 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 FHL3Q13643 280 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 DCAF4L1Q3SXM0 396 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FKBP15Q5T1M5 1219 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ZNF280DQ6N043 979 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PGBD2Q6P3X8 592 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FAM180AQ6UWF9 173 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PLA2G4DQ86XP0 818 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 TMTC1Q8IUR5 882 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 FBXL16Q8N461 479 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 CTCFLQ8NI51 663 aaPredicted RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 CPT1CQ8TCG5 803 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 CRYGNQ8WXF5 182 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 CDK5RAP1Q96SZ6 601 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 SLC26A6Q9BXS9 759 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PANK2Q9BZ23 570 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ZNF518BQ9C0D4 1074 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 NXF3Q9H4D5 531 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 HCFC1R1Q9NWW0 138 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 ORC3Q9UBD5 711 aaPredicted RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 PADI4Q9UM07 663 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 TSC22D4Q9Y3Q8 395 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 HS3ST4Q9Y661 456 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 PTPRDP23468 1912 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 WDR87Q6ZQQ6 2873 aa4.35□□□□□ -1.71
SLF1-202ENST00000450932 URB1O60287 2271 aaKnown RBP4.35□□□□□ -1.71
SLF1-202ENST00000450932 WDFY4Q6ZS81 3184 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 MYO16Q9Y6X6 1858 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 DRGXA6NNA5 263 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 SLC9A3R1O14745 358 aaPredicted RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 CYTH3O43739 400 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 NFATC1O95644 943 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 BTF3P20290 206 aaKnown RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 TUFMP49411 452 aaKnown RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 RCAN1P53805 252 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 NPEPPSP55786 919 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 CLRN1P58418 232 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 PTENP60484 403 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 ROR1Q01973 937 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 PRKCEQ02156 737 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 ANKRD1Q15327 319 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 NPY5RQ15761 445 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 CAVIN1Q6NZI2 390 aaKnown RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 MOXD1Q6UVY6 613 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 PRSS55Q6UWB4 352 aaPredicted RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 MOGAT3Q86VF5 341 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 ARID3BQ8IVW6 561 aaPredicted RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 SRBD1Q8N5C6 995 aaKnown RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.34□□□□□ -1.71
SLF1-202ENST00000450932 SLC16A11Q8NCK7 471 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 RPLP0P6Q8NHW5 317 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 CCDC12Q8WUD4 166 aaPredicted RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 TFAP2CQ92754 450 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 PSMG2Q969U7 264 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 MOCOSQ96EN8 888 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 OR14A2Q96R54 314 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 ZNF577Q9BSK1 485 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 USP29Q9HBJ7 922 aa4.34□□□□□ -1.71
SLF1-202ENST00000450932 SIDT1Q9NXL6 827 aaKnown RBP4.34□□□□□ -1.71
SLF1-202ENST00000450932 MOCS1Q9NZB8 636 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms