RNA–Protein interactions for RNA: ENST00000412844.6

NR1I3-208, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-208ENST00000412844 CORO1AP31146 461 aaKnown RBP6.96□□□□□ -1.3
NR1I3-208ENST00000412844 STAT6P42226 847 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 LSSP48449 732 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 HARS2P49590 506 aaKnown RBP6.96□□□□□ -1.3
NR1I3-208ENST00000412844 SLC8A3P57103 927 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 ST8SIA6P61647 398 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 CYP24A1Q07973 514 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 SGSM1Q2NKQ1 1148 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 SFMBT2Q5VUG0 894 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 PAQR9Q6ZVX9 377 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 FKBP9P1Q75LS8 142 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 FAM124AQ86V42 546 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 C12orf56Q8IXR9 622 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.96□□□□□ -1.3
NR1I3-208ENST00000412844 OR2T34Q8NGX1 318 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 ATL2Q8NHH9 583 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 WDR48Q8TAF3 677 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 SLC2A14Q8TDB8 520 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 KCNE4Q8WWG9 221 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 CCDC47Q96A33 483 aaKnown RBP6.96□□□□□ -1.3
NR1I3-208ENST00000412844 ZBTB8AQ96BR9 441 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 HIC2Q96JB3 615 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 PWWP2AQ96N64 755 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 HNRNPABQ99729 332 aaKnown RBP6.96□□□□□ -1.3
NR1I3-208ENST00000412844 IMPG2Q9BZV3 1241 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 XYLT2Q9H1B5 865 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 PLK2Q9NYY3 685 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 NCKIPSDQ9NZQ3 722 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 DMTF1Q9Y222 760 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 KCTD3Q9Y597 815 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 SPO11Q9Y5K1 396 aa6.96□□□□□ -1.3
NR1I3-208ENST00000412844 MYLKQ15746 1914 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 NUMA1Q14980 2115 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 UBR5O95071 2799 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 PVALEFA0A1B0GWK0 134 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TYW5A2RUC4 315 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TLR4O00206 839 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 IKBKBO14920 756 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 IRAK2O43187 625 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CTIFO43310 598 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 SLC28A2O43868 658 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CYP7B1O75881 506 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 FBXO21O94952 628 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TBX18O95935 607 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 IGHV4-34P06331 123 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 SLC9A1P19634 815 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 SDHAP31040 664 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 DUSP3P51452 185 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CASP5P51878 434 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ITGA1P56199 1179 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 MAP3K7CLP57077 242 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 MYL6P60660 151 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 RPS14P62263 151 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 BIRC3Q13489 604 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 STX1AQ16623 288 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ATP13A4Q4VNC1 1196 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 COBLL1Q53SF7 1204 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 FOXR2Q6PJQ5 311 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 PCSK4Q6UW60 755 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CLEC20AQ6ZU45 233 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 USP49Q70CQ1 688 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 RSRC2Q7L4I2 434 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 FAM129CQ86XR2 697 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 MARCH9Q86YJ5 346 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CCDC117Q8IWD4 279 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ZZZ3Q8IYH5 903 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 EID2Q8N6I1 236 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 KYQ8NBH2 561 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ZMIZ2Q8NF64 920 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 GANCQ8TET4 914 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TMEM174Q8WUU8 243 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ANKRD7Q92527 254 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ERCC4Q92889 916 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 HPS3Q969F9 1004 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CCDC127Q96BQ5 260 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 FAXDC2Q96IV6 333 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 SMOQ99835 787 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 GORASP1Q9BQQ3 440 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 UBXN6Q9BZV1 441 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 RSPH9Q9H1X1 276 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 IKZF4Q9H2S9 585 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 PABPC3Q9H361 631 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 GOLPH3LQ9H4A5 285 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 POLR1BQ9H9Y6 1135 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 CYP3A43Q9HB55 503 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 DLL4Q9NR61 685 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 AASDHPPTQ9NRN7 309 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 AGPAT3Q9NRZ7 376 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 STOML2Q9UJZ1 356 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 AGO1Q9UL18 857 aaKnown RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 NME7Q9Y5B8 376 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 HEMK1Q9Y5R4 338 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 AHCTF1Q8WYP5 2266 aa6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TP53BP1Q12888 1972 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 ARID1BQ8NFD5 2236 aaPredicted RBP6.95□□□□□ -1.3
NR1I3-208ENST00000412844 TARSL2A2RTX5 802 aaKnown RBP6.94□□□□□ -1.3
NR1I3-208ENST00000412844 SLC7A4O43246 635 aa6.94□□□□□ -1.3
NR1I3-208ENST00000412844 MT-CO3P00414 261 aa6.94□□□□□ -1.3
NR1I3-208ENST00000412844 KLKB1P03952 638 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms