RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ELAVL2Q12926 359 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 LSM12Q3MHD2 195 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 PABPC1LQ4VXU2 614 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 IL31Q6EBC2 164 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF549Q6P9A3 640 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 VWCEQ96DN2 955 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 TMEM175Q9BSA9 504 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 MRPL9Q9BYD2 267 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 CWH43Q9H720 699 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 DCLRE1BQ9H816 532 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 GPAMQ9HCL2 828 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 DNMT3LQ9UJW3 386 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 FIS1Q9Y3D6 152 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 TRIM17Q9Y577 477 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC4A7Q9Y6M7 1214 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 ANAPC1Q9H1A4 1944 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 GOT2P00505 430 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 PRAMEP78395 509 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 KLF10Q13118 480 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 PLD1Q13393 1074 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 TRIM67Q6ZTA4 783 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 C16orf59Q7L2K0 433 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 GBP5Q96PP8 586 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 MFSD1Q9H3U5 465 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.24■□□□□ 0.032e-7■■■□□ 16.7
SCAMP4-202ENST00000409472 PACSIN3Q9UKS6 424 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 SORCS3Q9UPU3 1222 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 ANKRD36A6QL64 1941 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 CCDC162PA2VCL2 907 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 A8MT66 165 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 HDAC3O15379 428 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 H2AFYO75367 372 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 STC2O76061 302 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 ITGAXP20702 1163 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 CORO1AP31146 461 aaKnown RBP15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 VEGFBP49765 207 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 SCNN1BP51168 640 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 EPHB1P54762 984 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 YBEYP58557 167 aaPredicted RBP15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 TIAL1Q01085 375 aaKnown RBP eCLIP15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 DNAL1Q4LDG9 190 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 GPR158Q5T848 1215 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 SEL1L3Q68CR1 1132 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 FAM117BQ6P1L5 589 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 KIAA0408Q6ZU52 694 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 AUTS2Q8WXX7 1259 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 TRIB3Q96RU7 358 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 CYP2S1Q96SQ9 504 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 ZBED2Q9BTP6 218 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 SMPD4Q9NXE4 827 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 PDP2Q9P2J9 529 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 MID2Q9UJV3 735 aa15.23■□□□□ 0.03
SCAMP4-202ENST00000409472 A0A087X1B8 175 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC7A4O43246 635 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 PAPSS2O95340 614 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 WISP3O95389 354 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 ALDH7A1P49419 539 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 CLCN5P51795 746 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 SH2D4BQ5SQS7 431 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 RNF168Q8IYW5 571 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 KDM1BQ8NB78 822 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 SREK1Q8WXA9 508 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 CCDC124Q96CT7 223 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 PHF21BQ96EK2 531 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 LENG8Q96PV6 779 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 MRPL57Q9BQC6 102 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 GALNT8Q9NY28 637 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 NVLO15381 856 aaKnown RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 FKTNO75072 461 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 COX4I1P13073 169 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 TSPAN8P19075 237 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 GSTT1P30711 240 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 USP41Q3LFD5 358 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 C5orf22Q49AR2 442 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 LINGO4Q6UY18 593 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 PTERQ96BW5 349 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 IGSF21Q96ID5 467 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 FEM1CQ96JP0 617 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 UBXN10Q96LJ8 280 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 CATSPER2Q96P56 530 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC22A12Q96S37 553 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 MGME1Q9BQP7 344 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 C1orf21Q9H246 121 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 ALG9Q9H6U8 611 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 NMRK1Q9NWW6 199 aa15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.22■□□□□ 0.03
SCAMP4-202ENST00000409472 MYL4P12829 197 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 PFKPQ01813 784 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 PRKAA1Q13131 559 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 C1orf146Q5VVC0 180 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 C2orf15Q8WU43 125 aaKnown RBP15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 EXT2Q93063 718 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 FAM96AQ9H5X1 160 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 GTSE1Q9NYZ3 720 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 STOML1Q9UBI4 398 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 MAGEA13PA6NCF6 341 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 HOXA2O43364 376 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 CXCL10P02778 98 aa15.21■□□□□ 0.03
SCAMP4-202ENST00000409472 POLD2P49005 469 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms