RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 RMND5AQ9H871 391 aa13.15□□□□□ -0.31
PTPRN2-202ENST00000389416 PEX11AO75192 247 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PRAMEF1O95521 474 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 ABCB1P08183 1280 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 FASTKQ14296 549 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 TEAD2Q15562 447 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 TRPV1Q8NER1 839 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 OTUB1Q96FW1 271 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM83DQ9H4H8 585 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PNPLA8Q9NP80 782 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 ACSS2Q9NR19 701 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 FSHRP23945 695 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PPIDQ08752 370 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 MAGEC3Q8TD91 643 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 KBTBD7Q8WVZ9 684 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 MAGED4Q96JG8 741 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 SLC40A1Q9NP59 571 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 IL23AQ9NPF7 189 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 WARS2Q9UGM6 360 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 KPNA5O15131 536 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PRKCGP05129 697 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 HLA-DQB2P05538 268 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 HNF4AP41235 474 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PIK3CGP48736 1102 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 ERVK-21P61565 698 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 TP53BP2Q13625 1128 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 CPSF6Q16630 551 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 PIWIL4Q7Z3Z4 852 aaKnown RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 DENND6AQ8IWF6 608 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 FAM126BQ8IXS8 530 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 ZNF614Q8N883 585 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 AHSPQ9NZD4 102 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 IGSF9Q9P2J2 1179 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 FKBPLQ9UIM3 349 aa13.14□□□□□ -0.31
PTPRN2-202ENST00000389416 TCRBV7S3A2A0A539 114 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 GJB5O95377 273 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 PDK4Q16654 411 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 HECTD2Q5U5R9 776 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 C10orf107Q8IVU9 208 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 ACDQ96AP0 544 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 FEM1CQ96JP0 617 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 PADI4Q9UM07 663 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 OR2AG2A6NM03 316 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 GDI1P31150 447 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 CHI3L1P36222 383 aaPredicted RBP13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 PEX19P40855 299 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SLC20A2Q08357 652 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 CYP2A13Q16696 494 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MS4A13Q5J8X5 152 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 TSTD2Q5T7W7 516 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX32Q86XE0 403 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SCUBE1Q8IWY4 988 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 TMEM237Q96Q45 408 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MYH4Q9Y623 1939 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 QSOX1O00391 747 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 TEX28O15482 410 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SLC35G4P0C7Q5 338 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SPAM1P38567 509 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 GABRB2P47870 512 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 SEMA5AQ13591 1074 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 CLLU1OSQ5K130 101 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 ST13P4Q8IZP2 240 aaPredicted RBP13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MARK4Q96L34 752 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 GPR21Q99679 349 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 VPS51Q9UID3 782 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 TMEM59LQ9UK28 342 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 LRP5O75197 1615 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 LYPLA1O75608 230 aaPredicted RBP13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 NQO1P15559 274 aaKnown RBP13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 RAB30Q15771 203 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 LYPLAL1Q5VWZ2 237 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 PRR23CQ6ZRP0 262 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 ASB2Q96Q27 587 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 DTNAQ9Y4J8 743 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 MYH8P13535 1937 aa13.13□□□□□ -0.31
PTPRN2-202ENST00000389416 ABCA3Q99758 1704 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CACNB4O00305 520 aaPredicted RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 SNX3O60493 162 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ADAMTS4O75173 837 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 ATP6V0D1P61421 351 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 CYTH1Q15438 398 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 FBXO48Q5FWF7 155 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 KYQ8NBH2 561 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MAGEB10Q96LZ2 347 aaPredicted RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 MYCBPQ99417 103 aaPredicted RBP13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 AGAP2Q99490 1192 aa13.12□□□□□ -0.31
PTPRN2-202ENST00000389416 TEX12Q9BXU0 123 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms