RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 MMP13P45452 471 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 PPARDQ03181 441 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 ZNF235Q14590 738 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 TCEA2Q15560 299 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 FAXCQ5TGI0 409 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 MARC1Q5VT66 337 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 ENPP7Q6UWV6 458 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 HSD11B1LQ7Z5J1 315 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 TSPAN33Q86UF1 283 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 SLC35G2Q8TBE7 412 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 ARRDC2Q8TBH0 407 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 IFI44Q8TCB0 444 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 PTCD2Q8WV60 388 aaKnown RBP17.1■□□□□ 0.33
BRCC3-202ENST00000340647 BTN2A2Q8WVV5 523 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 OR1E3Q8WZA6 343 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 PDXPQ96GD0 296 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 TSGA13Q96PP4 275 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 MCCC1Q96RQ3 725 aaPredicted RBP17.1■□□□□ 0.33
BRCC3-202ENST00000340647 ZNF670Q9BS34 389 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 NRSN2Q9GZP1 204 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 NHEJ1Q9H9Q4 299 aaPredicted RBP17.1■□□□□ 0.33
BRCC3-202ENST00000340647 FGF22Q9HCT0 170 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 NT5MQ9NPB1 228 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 SCUBE2Q9NQ36 999 aa17.1■□□□□ 0.33
BRCC3-202ENST00000340647 MRPL40Q9NQ50 206 aaKnown RBP17.1■□□□□ 0.33
BRCC3-202ENST00000340647 MTA2O94776 668 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 HEXIM1O94992 359 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 ELFN1P0C7U0 828 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 ALPPL2P10696 532 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 KDELR1P24390 212 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 MAN1A1P33908 653 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 SERPINB6P35237 376 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 HNF1BP35680 557 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 SSR1P43307 286 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 SRP54P61011 504 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 NIPAL4Q0D2K0 466 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 TRIM14Q14142 442 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 HADHQ16836 314 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 C6orf132Q5T0Z8 1188 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 CFAP58Q5T655 872 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 ESRP1Q6NXG1 681 aaKnown RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 HID1Q8IV36 788 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 PLD5Q8N7P1 536 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 CTNNBL1Q8WYA6 563 aaPredicted RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 FATE1Q969F0 183 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 CRELD1Q96HD1 420 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 BBC3Q96PG8 261 aaPredicted RBP17.09■□□□□ 0.33
BRCC3-202ENST00000340647 USP29Q9HBJ7 922 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 DTLQ9NZJ0 730 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 RABGEF1Q9UJ41 708 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 ST14Q9Y5Y6 855 aa17.09■□□□□ 0.33
BRCC3-202ENST00000340647 A0A087WV48 116 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 TMEM110-MUSTN1A8MSY1 372 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 CBFA2T2O43439 604 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 HOXC4P09017 264 aaPredicted RBP17.08■□□□□ 0.32
BRCC3-202ENST00000340647 ALPIP09923 528 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 PDX1P52945 283 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 KIAA1024LP59773 190 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 DSC2Q02487 901 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 MESDQ14696 234 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 PDK2Q15119 407 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 PNCKQ6P2M8 343 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 CRTC1Q6UUV9 634 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 EFL1Q7Z2Z2 1120 aaKnown RBP17.08■□□□□ 0.32
BRCC3-202ENST00000340647 TECPR1Q7Z6L1 1165 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 LRRC49Q8IUZ0 686 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 KCTD6Q8NC69 237 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 SCRN2Q96FV2 425 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 WDR92Q96MX6 357 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 RNF157Q96PX1 679 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 RBM15Q96T37 977 aaKnown RBP eCLIP17.08■□□□□ 0.32
BRCC3-202ENST00000340647 IL12RB2Q99665 862 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 SEMA3CQ99985 751 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 SLC13A1Q9BZW2 595 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 RAI2Q9Y5P3 530 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 DGKBQ9Y6T7 804 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 PTPRQQ9UMZ3 2332 aa17.08■□□□□ 0.32
BRCC3-202ENST00000340647 CPED1A4D0V7 1026 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 MATN3O15232 486 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 AKR1B10O60218 316 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 SOD1P00441 154 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 CPP00450 1065 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 HLA-DQB2P05538 268 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 TPM3P06753 285 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 MMP2P08253 660 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 CTPS1P17812 591 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 CCNCP24863 283 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 VIPR1P32241 457 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 ETV3P41162 512 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 TCEAL1Q15170 157 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 RALGPS1Q5JS13 557 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 Q6ZVL8 140 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 RD3Q7Z3Z2 195 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 CNTD1Q8N815 330 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 TC2NQ8N9U0 490 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 KYQ8NBH2 561 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 CCL4L1Q8NHW4 92 aa17.07■□□□□ 0.32
BRCC3-202ENST00000340647 PDCD6IPQ8WUM4 868 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms