RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 RALGDSQ12967 914 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 MTM1Q13496 603 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 IRF4Q15306 451 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 IFI16Q16666 785 aaKnown RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 LRRC38Q5VT99 294 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 TIGD7Q6NT04 549 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 ZCCHC8Q6NZY4 707 aaKnown RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 KDM7AQ6ZMT4 941 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 VSIG1Q86XK7 387 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 PROSER1Q86XN7 944 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 PHACTR4Q8IZ21 702 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SDR16C5Q8N3Y7 309 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 PQLC3Q8N755 202 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 LMX1AQ8TE12 382 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SCRN2Q96FV2 425 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 APOLD1Q96LR9 279 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 RNF157Q96PX1 679 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 APOOQ9BUR5 198 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SLC13A1Q9BZW2 595 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 CCDC86Q9H6F5 360 aaKnown RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 CAAP1Q9H8G2 361 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SPTLC3Q9NUV7 552 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 EVA1BQ9NVM1 165 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 KCTD5Q9NXV2 234 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 SPASTQ9UBP0 616 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 PNMA8BQ9ULN7 279 aaPredicted RBP10.57□□□□□ -0.72
CCDC9-203ENST00000596938 COQ6Q9Y2Z9 468 aa10.57□□□□□ -0.72
CCDC9-203ENST00000596938 LAMA5O15230 3695 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 LY6G6EA0A0G2JKS1 128 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 FAM149AA5PLN7 773 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 LMO7DNF2Z398 122 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 TAF4O00268 1085 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 MFSD11O43934 449 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 GCATO75600 419 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 PGLSO95336 258 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 PRKCGP05129 697 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 ELFN1P0C7U0 828 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 SLC1A1P43005 524 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 HK3P52790 923 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 MAXP61244 160 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 DAB2P98082 770 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 SEMG2Q02383 582 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
CCDC9-203ENST00000596938 TARDBPQ13148 414 aaKnown RBP eCLIP10.56□□□□□ -0.72
CCDC9-203ENST00000596938 PRRT3Q5FWE3 981 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 FAXCQ5TGI0 409 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 ALG1LQ6GMV1 187 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 LVRNQ6Q4G3 990 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 MARCH9Q86YJ5 346 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 TC2NQ8N9U0 490 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 ATL2Q8NHH9 583 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 RAPGEF5Q92565 580 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 COQ10AQ96MF6 247 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 IL12RB2Q99665 862 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 NT5MQ9NPB1 228 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 HAUS2Q9NVX0 235 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 APOBEC3BQ9UH17 382 aaKnown RBP10.56□□□□□ -0.72
CCDC9-203ENST00000596938 U3KQA8 63 aa10.56□□□□□ -0.72
CCDC9-203ENST00000596938 IGF2RP11717 2491 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 C3orf70A6NLC5 250 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 YY2O15391 372 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 FZD6O60353 706 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 NEBLO76041 1014 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 HEXIM1O94992 359 aaKnown RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 RASGRP1O95267 797 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 LCA5LO95447 670 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 CPP00450 1065 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 CCNB1P14635 433 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 TSHRP16473 764 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 GM2AP17900 193 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 VIPR1P32241 457 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 GJC1P36383 396 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 HADHBP55084 474 aaKnown RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 SRP54P61011 504 aaKnown RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 GBE1Q04446 702 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 TRAF2Q12933 501 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 NFATC4Q14934 902 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 ELOCQ15369 112 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 ALG11Q2TAA5 492 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 ZFYVE27Q5T4F4 411 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 ARMC12Q5T9G4 340 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 HES3Q5TGS1 186 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 ENPP7Q6UWV6 458 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 CCDC170Q8IYT3 715 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 RBFAQ8N0V3 343 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 NDUFAF2Q8N183 169 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 FSTL5Q8N475 847 aaPredicted RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 DCBLD1Q8N8Z6 715 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 PLA2G15Q8NCC3 412 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 TPCN2Q8NHX9 752 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 PDCD6IPQ8WUM4 868 aaKnown RBP10.55□□□□□ -0.72
CCDC9-203ENST00000596938 PIH1D2Q8WWB5 315 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 GLMNQ92990 594 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 HDAC11Q96DB2 347 aa10.55□□□□□ -0.72
CCDC9-203ENST00000596938 MCCC1Q96RQ3 725 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms