RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 ALG6Q9Y672 507 aa22.42■■□□□ 1.18
GTF2F1-204ENST00000594965 A0A1W2PQ67 120 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 FZD6O60353 706 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 NEBLO76041 1014 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 RECQL5O94762 991 aaPredicted RBP22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PGLSO95336 258 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 CPP00450 1065 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 KRT1P04264 644 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 HLA-DQB2P05538 268 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 ELFN1P0C7U0 828 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 TNNT1P13805 278 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 CCNB1P14635 433 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 MX2P20592 715 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 NOP2P46087 812 aaKnown RBP22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 THOP1P52888 689 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 DSC2Q02487 901 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PPIDQ08752 370 aaKnown RBP22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 INPP5AQ14642 412 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PTPRRQ15256 657 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 MFSD7Q6UXD7 560 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 MACC1Q6ZN28 852 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 NYAP1Q6ZVC0 841 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 MARCH9Q86YJ5 346 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 CCDC13Q8IYE1 715 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 RBFAQ8N0V3 343 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PAF1Q8N7H5 531 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PLA2G15Q8NCC3 412 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 ARRDC2Q8TBH0 407 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PIH1D2Q8WWB5 315 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 POLR1EQ9GZS1 481 aaKnown RBP22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 SALL4Q9UJQ4 1053 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 PHTF1Q9UMS5 762 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 RAI2Q9Y5P3 530 aa22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 EPN1Q9Y6I3 576 aaPredicted RBP22.41■■□□□ 1.18
GTF2F1-204ENST00000594965 SCAMP1O15126 338 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 SPOPO43791 374 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 RFPL3O75679 317 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 PDHA1P08559 390 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 JUNDP17535 347 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 CKMT2P17540 419 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 CYLC1P35663 651 aaPredicted RBP22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 ITKQ08881 620 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 NIPAL4Q0D2K0 466 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 SPA17Q15506 151 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 SMAD1Q15797 465 aaKnown RBP22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 CNGA3Q16281 694 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 NPNTQ6UXI9 565 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 CBARPQ8N350 705 aaPredicted RBP22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 LGMNQ99538 433 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 APOOQ9BUR5 198 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 DDX56Q9NY93 547 aaKnown RBP22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 NLGN3Q9NZ94 848 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 AMACRQ9UHK6 382 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 PPIL1Q9Y3C6 166 aa22.4■■□□□ 1.18
GTF2F1-204ENST00000594965 A0A0A6YYK5 440 aaPredicted RBP22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 LY6G6EA0A0G2JKS1 128 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 RCCD1A6NED2 376 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 H3BM21 787 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 APOL1O14791 398 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 NDUFA10O95299 355 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 PCCBP05166 539 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 C1SP09871 688 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 LHCGRP22888 699 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 ACP1P24666 158 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 VIPR1P32241 457 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 PEX5P50542 639 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 MTM1Q13496 603 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 TAZQ16635 292 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 FAM182AQ5T1J6 154 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 ARMC12Q5T9G4 340 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 RAD9BQ6WBX8 426 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 PELI3Q8N2H9 469 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 COQ10AQ96MF6 247 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 OLFM3Q96PB7 478 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 SMIM14Q96QK8 99 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 MCCC1Q96RQ3 725 aaPredicted RBP22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 IL12RB2Q99665 862 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 REXO2Q9Y3B8 237 aaKnown RBP22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 OR1A2Q9Y585 309 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 HEY1Q9Y5J3 304 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 CSNK1G3Q9Y6M4 447 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 U3KQA8 63 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 FRYQ5TBA9 3013 aa22.39■■□□□ 1.17
GTF2F1-204ENST00000594965 NEMP2A6NFY4 417 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 NPIPB15A6NHN6 443 aaPredicted RBP22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 K7ESM1 405 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 PSTPIP1O43586 416 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 GCATO75600 419 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 HEXIM1O94992 359 aaKnown RBP22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 CAPNS1P04632 268 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 MYF5P13349 255 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 CDKN2BP42772 138 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 CLDN6P56747 220 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 NFATC4Q14934 902 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 ST3GAL2Q16842 350 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 RFX6Q8HWS3 928 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 PHACTR4Q8IZ21 702 aa22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.38■■□□□ 1.17
GTF2F1-204ENST00000594965 KDF1Q8NAX2 398 aaPredicted RBP22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms