RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 LIG3P49916 1009 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 RPS21P63220 83 aaKnown RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 BNC1Q01954 994 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 OLIG2Q13516 323 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 DUOXA1Q1HG43 343 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 TMEM52BQ4KMG9 183 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SETMARQ53H47 684 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 ANKRD20A2Q5SQ80 823 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 ANKRD20A1Q5TYW2 823 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 ANKRD20A3Q5VUR7 823 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 KIAA1161Q6NSJ0 714 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 NEK5Q6P3R8 708 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 TADA1Q96BN2 335 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 OSBPL9Q96SU4 736 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SLC17A9Q9BYT1 436 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 HAUS2Q9NVX0 235 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 MYLKQ15746 1914 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 KHNYNO15037 678 aaKnown RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 PIRTP0C851 137 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 ETS1P14921 441 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 GNSP15586 552 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 CES1P23141 567 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 HNF1BP35680 557 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 EPHB1P54762 984 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 POLR2LP62875 67 aaKnown RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 ELP6Q0PNE2 266 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 OASLQ15646 514 aaKnown RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 FAXCQ5TGI0 409 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SLC23A3Q6PIS1 610 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 KDELC1Q6UW63 502 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 DPPA4Q7L190 304 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 GLIS1Q8NBF1 620 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SPATA13Q96N96 652 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 TRIB3Q96RU7 358 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 VAT1Q99536 393 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 MLPHQ9BV36 600 aaPredicted RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 GTPBP2Q9BX10 602 aaKnown RBP12.68□□□□□ -0.38
RETREG3-203ENST00000585894 C1QTNF2Q9BXJ5 285 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 AP1M1Q9BXS5 423 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 GBA3Q9H227 469 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 CAAP1Q9H8G2 361 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 CAPN10Q9HC96 672 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SUSD2Q9UGT4 822 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 PHTF1Q9UMS5 762 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SNX12Q9UMY4 172 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 SLC6A14Q9UN76 642 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 TDRD6O60522 2096 aaKnown RBP12.67□□□□□ -0.38
RETREG3-203ENST00000585894 LRP3O75074 770 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 ENGP17813 658 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 GM2AP17900 193 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 CHRNA4P43681 627 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 KCNJ1P48048 391 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 AFF3P51826 1226 aaKnown RBP12.67□□□□□ -0.38
RETREG3-203ENST00000585894 WNT3AP56704 352 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 GRIK2Q13002 908 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 SGCGQ13326 291 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 CNGA3Q16281 694 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 QPCTQ16769 361 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 AASDHQ4L235 1098 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-203ENST00000585894 PRAMEF14Q5SWL7 426 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 NAPEPLDQ6IQ20 393 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 LIPIQ6XZB0 460 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 GCNT7Q6ZNI0 430 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 RFLNAQ6ZTI6 216 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 C12orf50Q8NA57 414 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-203ENST00000585894 TMEM145Q8NBT3 493 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 IPMKQ8NFU5 416 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 SPOCK2Q92563 424 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 RMDN1Q96DB5 314 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 FCRL5Q96RD9 977 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 KLF6Q99612 283 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-203ENST00000585894 TRHDEQ9UKU6 1024 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 ZNF148Q9UQR1 794 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 SPTBN4Q9H254 2564 aa12.67□□□□□ -0.38
RETREG3-203ENST00000585894 DNAH14Q0VDD8 3507 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 A0A0J9YYE9 177 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 A0A1W2PR77 199 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 POM121BA6NF01 834 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 TM7SF2O76062 418 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 STK10O94804 968 aaKnown RBP12.66□□□□□ -0.38
RETREG3-203ENST00000585894 METTL18O95568 372 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 TRBC1P01850 177 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 ELFN1P0C7U0 828 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 HNRNPA2B1P22626 353 aaKnown RBP12.66□□□□□ -0.38
RETREG3-203ENST00000585894 CA4P22748 312 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 MSNP26038 577 aaKnown RBP12.66□□□□□ -0.38
RETREG3-203ENST00000585894 VIPR1P32241 457 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 HOXD12P35452 270 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 SUOXP51687 545 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 RACK1P63244 317 aaKnown RBP12.66□□□□□ -0.38
RETREG3-203ENST00000585894 CDK18Q07002 472 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 KIF19Q2TAC6 998 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 CRTC1Q6UUV9 634 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 USP45Q70EL2 814 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 HSD11B1LQ7Z5J1 315 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 RASGEF1CQ8N431 466 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 PRELID2Q8N945 189 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 CEP76Q8TAP6 659 aa12.66□□□□□ -0.38
RETREG3-203ENST00000585894 IFT43Q96FT9 208 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms