RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 LCMT1Q9UIC8 334 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 U3KQA8 63 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 ARID1BQ8NFD5 2236 aaPredicted RBP21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 LAMA5O15230 3695 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 SOCS5O75159 536 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 PCCBP05166 539 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 ELFN1P0C7U0 828 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 GARSP41250 739 aaKnown RBP21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 PEX5P50542 639 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 INSM1Q01101 510 aaPredicted RBP21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 TRAF2Q12933 501 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 C1orf61Q13536 156 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 DEFB133Q30KQ1 61 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 NYAP1Q6ZVC0 841 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 CNGA4Q8IV77 575 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 MAP7D3Q8IWC1 876 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 TEX26Q8N6G2 289 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 PQLC3Q8N755 202 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 PDCD7Q8N8D1 485 aaKnown RBP21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 PLA2G15Q8NCC3 412 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 SPOCK2Q92563 424 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 RAPGEF5Q92565 580 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 APOOQ9BUR5 198 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 LRRC61Q9BV99 259 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 SLC13A1Q9BZW2 595 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 SPASTQ9UBP0 616 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 B4GALT6Q9UBX8 382 aa21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 DSPP15924 2871 aaKnown RBP21.55■■□□□ 1.04
PPP4R1-228ENST00000584074 AKR1B15C9JRZ8 316 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 CPP00450 1065 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 GM2AP17900 193 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 PPARDQ03181 441 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 CYP4F3Q08477 520 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 ZFYVE27Q5T4F4 411 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 ZCCHC8Q6NZY4 707 aaKnown RBP21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 LRRN4Q8WUT4 740 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 RFFLQ8WZ73 363 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 TSACCQ96A04 125 aaPredicted RBP21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 FAF2Q96CS3 445 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 CLPBQ9H078 707 aa21.54■■□□□ 1.04
PPP4R1-228ENST00000584074 E2F1Q01094 437 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 GBE1Q04446 702 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 ITKQ08881 620 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 MTM1Q13496 603 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 NFATC4Q14934 902 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 ACOX1Q15067 660 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 PTPRRQ15256 657 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 ALG11Q2TAA5 492 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 RALGPS1Q5JS13 557 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 SARM1Q6SZW1 724 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 ENPP7Q6UWV6 458 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 HID1Q8IV36 788 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 IL12RB2Q99665 862 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 SEMA3CQ99985 751 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 TRIM5Q9C035 493 aa21.53■■□□□ 1.04
PPP4R1-228ENST00000584074 CHD6Q8TD26 2715 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 A0A1W2PQ67 120 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 LMO7DNF2Z398 122 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TPP1O14773 563 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 MTA2O94776 668 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 CELA2BP08218 269 aaPredicted RBP21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TSHRP16473 764 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 KDELR1P24390 212 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 HTR1BP28222 390 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 SLC10A2Q12908 348 aaPredicted RBP21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TCEA2Q15560 299 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 CNGA3Q16281 694 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 RD3Q7Z3Z2 195 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 MAML1Q92585 1016 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TBATAQ96M53 351 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TSGA13Q96PP4 275 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 USP29Q9HBJ7 922 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 PHTF1Q9UMS5 762 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 CLCA2Q9UQC9 943 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 RAI2Q9Y5P3 530 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 CELSR3Q9NYQ7 3312 aa21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 TDRD6O60522 2096 aaKnown RBP21.52■■□□□ 1.04
PPP4R1-228ENST00000584074 MATN3O15232 486 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 YY2O15391 372 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 OPA1O60313 960 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 PGLSO95336 258 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 CCNCP24863 283 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 VIPR1P32241 457 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 ARHGAP25P42331 645 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 DUSP3P51452 185 aaPredicted RBP21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 HK3P52790 923 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 IHHQ14623 411 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 IFI16Q16666 785 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 CDKN3Q16667 212 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 ARMC12Q5T9G4 340 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 KCTD16Q68DU8 428 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 RHOT2Q8IXI1 618 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 PELI3Q8N2H9 469 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 FUBP1Q96AE4 644 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 COQ10AQ96MF6 247 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 WDR92Q96MX6 357 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 RNF157Q96PX1 679 aa21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 POLR1EQ9GZS1 481 aaKnown RBP21.51■■□□□ 1.03
PPP4R1-228ENST00000584074 DTLQ9NZJ0 730 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms