RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 EXTL3O43909 919 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 SNX2O60749 519 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 CBFA2T3O75081 653 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 ZFYP08048 801 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-214ENST00000572365 PDHA1P08559 390 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 EGR2P11161 476 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-214ENST00000572365 PAX3P23760 479 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 NTSR1P30989 418 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 PTGS2P35354 604 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 MPLP40238 635 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 RPS9P46781 194 aaKnown RBP5.76□□□□□ -1.49
SF3B3-214ENST00000572365 OR1G1P47890 313 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 PNLIPRP1P54315 467 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 TIRAPP58753 221 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 CREB5Q02930 508 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 GIT2Q14161 759 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 CLCA4Q14CN2 919 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 ASPRV1Q53RT3 343 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 MAVSQ7Z434 540 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 LONP2Q86WA8 852 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 CMASQ8NFW8 434 aaPredicted RBP5.76□□□□□ -1.49
SF3B3-214ENST00000572365 OR1N1Q8NGS0 311 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 MYCBPAPQ8TBZ2 947 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 ASB10Q8WXI3 467 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 FAM3CQ92520 227 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 GRAMD1AQ96CP6 724 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 RSPRY1Q96DX4 576 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 PGBD1Q96JS3 809 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 SENP7Q9BQF6 1050 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 SH2D3AQ9BRG2 576 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 NUDT22Q9BRQ3 303 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 LRRCC1Q9C099 1032 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 FSCN3Q9NQT6 498 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 MIOSQ9NXC5 875 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 SLC9A2Q9UBY0 812 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 MAD2L2Q9UI95 211 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 RIMKLBQ9ULI2 386 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 TRIP11Q15643 1979 aa5.76□□□□□ -1.49
SF3B3-214ENST00000572365 KNTC1P50748 2209 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 UTP20O75691 2785 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SPTA1P02549 2419 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 PIPSLA2A3N6 862 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SLC16A3O15427 465 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ADAM12O43184 909 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 CYTH3O43739 400 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 USP1O94782 785 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 CCNE2O96020 404 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ERBB2P04626 1255 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 URODP06132 367 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ANXA6P08133 673 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 CCDC192P0DO97 292 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 CHRNB1P11230 501 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 GDI1P31150 447 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 HTR7P34969 479 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 CCR3P51677 355 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ALDH18A1P54886 795 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 IRX4P78413 519 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SIM1P81133 766 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 DRP2Q13474 957 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 TEDDM1Q5T9Z0 273 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ABHD17BQ5VST6 288 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SLC9A4Q6AI14 798 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 TWF2Q6IBS0 349 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 RFX8Q6ZV50 586 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF589Q86UQ0 364 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 NRSN1Q8IZ57 195 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SUN3Q8TAQ9 357 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 HAS1Q92839 578 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 TCEAL4Q96EI5 215 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 GLOD4Q9HC38 313 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 TRIM36Q9NQ86 728 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 PRDM8Q9NQV8 689 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ITM2CQ9NQX7 267 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 MARCH5Q9NX47 278 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 BCCIPQ9P287 314 aaKnown RBP eCLIP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 GTF2A1LQ9UNN4 478 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 USP22Q9UPT9 525 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SH2B3Q9UQQ2 575 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 DRG1Q9Y295 367 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 SLC27A6Q9Y2P4 619 aa5.75□□□□□ -1.49
SF3B3-214ENST00000572365 ZNF638Q14966 1978 aaKnown RBP5.75□□□□□ -1.49
SF3B3-214ENST00000572365 VWA8A3KMH1 1905 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 KNL1Q8NG31 2342 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 A0A0D9SFI3 127 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 LNP1A1A4G5 178 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 A1L4Q6 167 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 WDR27A2RRH5 827 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 SLC38A8A6NNN8 435 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 C1QTNF3-AMACRE9PGA6 284 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 FCHO1O14526 889 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 CDX4O14627 284 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 MEIS2O14770 477 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 ZSCAN9O15535 394 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 IRAK2O43187 625 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 DNPH1O43598 174 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 HBP1O60381 514 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 RPP40O75818 363 aaKnown RBP5.74□□□□□ -1.49
SF3B3-214ENST00000572365 ACTL6BO94805 426 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 EPN2O95208 641 aa5.74□□□□□ -1.49
SF3B3-214ENST00000572365 C22orf31O95567 290 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms