RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 LZTS3O60299 673 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 MFAP3LO75121 409 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 RECQL5O94762 991 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 MAP3K6O95382 1288 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 TMEM253P0C7T8 217 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 ALPPL2P10696 532 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 TSHRP16473 764 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 SERPINB6P35237 376 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 HNF1BP35680 557 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 GJC1P36383 396 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 PEX5P50542 639 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 POLR2LP62875 67 aaKnown RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 GALNT2Q10471 571 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 TRAF2Q12933 501 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 TRIM14Q14142 442 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 ZNF235Q14590 738 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 PAFAH1B3Q15102 231 aaKnown RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 HADHQ16836 314 aaKnown RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 ALG11Q2TAA5 492 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 DEFB133Q30KQ1 61 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 ANKRD20A8PQ5CZ79 823 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 DPPA4Q7L190 304 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 CACTIN-AS1Q8N1I8 211 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 CBARPQ8N350 705 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 TEX26Q8N6G2 289 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 PQLC3Q8N755 202 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 DCBLD1Q8N8Z6 715 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 LRRN4Q8WUT4 740 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 CTNNBL1Q8WYA6 563 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 TSACCQ96A04 125 aaPredicted RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 FAF2Q96CS3 445 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 DUSP23Q9BVJ7 150 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 SPTLC3Q9NUV7 552 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 B4GALT6Q9UBX8 382 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 APOBEC3BQ9UH17 382 aaKnown RBP14.72□□□□□ -0.05
FANCA-220ENST00000566409 RAXQ9Y2V3 346 aa14.72□□□□□ -0.05
FANCA-220ENST00000566409 LOC400499M0QZD8 3231 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 LMO7DNF2Z398 122 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 TPP1O14773 563 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 CASC3O15234 703 aaKnown RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 YY2O15391 372 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 AKR1B10O60218 316 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 OPA1O60313 960 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 SOCS5O75159 536 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 PCCBP05166 539 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 HSPA9P38646 679 aaKnown RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 GARSP41250 739 aaKnown RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 MMP13P45452 471 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 HK3P52790 923 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 E2F1Q01094 437 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 PPARDQ03181 441 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 SLC10A2Q12908 348 aaPredicted RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 TBX2Q13207 712 aaPredicted RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 CDKN3Q16667 212 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 HS1BP3Q53T59 392 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 FAXCQ5TGI0 409 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 MARC1Q5VT66 337 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 CDCP2Q5VXM1 449 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 ZCCHC8Q6NZY4 707 aaKnown RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 KCTD6Q8NC69 237 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 SLC35G2Q8TBE7 412 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 BTN2A2Q8WVV5 523 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 RAPGEF5Q92565 580 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 ZNF670Q9BS34 389 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 BOCQ9BWV1 1114 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 NHEJ1Q9H9Q4 299 aaPredicted RBP14.71□□□□□ -0.05
FANCA-220ENST00000566409 SCUBE2Q9NQ36 999 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 SPASTQ9UBP0 616 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 SALL4Q9UJQ4 1053 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 CLCA2Q9UQC9 943 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 GPSM3Q9Y4H4 160 aa14.71□□□□□ -0.05
FANCA-220ENST00000566409 CACNA1GO43497 2377 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 SMG1Q96Q15 3661 aaKnown RBP14.7□□□□□ -0.06
FANCA-220ENST00000566409 A0A0U1RQS6 177 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 TMEM110-MUSTN1A8MSY1 372 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 MT-CO3P00414 261 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 ELFN1P0C7U0 828 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 LHCGRP22888 699 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 MAN1A1P33908 653 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 TRIM23P36406 574 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 GBE1Q04446 702 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 MTM1Q13496 603 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 MESDQ14696 234 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 NFATC4Q14934 902 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 PDK2Q15119 407 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 TCEA2Q15560 299 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 CNGA3Q16281 694 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 GUSBP11Q6P575 273 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 ENPP7Q6UWV6 458 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 LRRC49Q8IUZ0 686 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 HID1Q8IV36 788 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 SLC35F3Q8IY50 421 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 IFI44Q8TCB0 444 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 PDCD6IPQ8WUM4 868 aaKnown RBP14.7□□□□□ -0.06
FANCA-220ENST00000566409 PIH1D2Q8WWB5 315 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 MAML1Q92585 1016 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 TBATAQ96M53 351 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 COQ10AQ96MF6 247 aa14.7□□□□□ -0.06
FANCA-220ENST00000566409 SMIM14Q96QK8 99 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms