RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 C19orf43Q9BQ61 176 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 MCMBPQ9BTE3 642 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 SNX15Q9NRS6 342 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
TPM1-215ENST00000558868 SLC8A2Q9UPR5 921 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 DOCK6Q96HP0 2047 aa13.85□□□□□ -0.19
TPM1-215ENST00000558868 GOLGA8TH3BQL2 631 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 K7ERQ8 282 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 PFDN6O15212 129 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 SMAD6O43541 496 aaKnown RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 FZD6O60353 706 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 PGLSO95336 258 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 GLP2RO95838 553 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 AHSGP02765 367 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 ALDOAP04075 364 aaKnown RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 DHRS4L1P0CG22 281 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 NEFHP12036 1026 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 CRABP2P29373 138 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 VASPP50552 380 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 CLCN5P51795 746 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 EML3Q32P44 896 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 GLIPR1L2Q4G1C9 344 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 TAF1BQ53T94 588 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 FAM78AQ5JUQ0 283 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 GKAP1Q5VSY0 366 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 MBLAC2Q68D91 279 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 C22orf39Q6P5X5 142 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 MICALCLQ6ZW33 695 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 CCDC91Q7Z6B0 441 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 LRRC34Q8IZ02 419 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 RYBPQ8N488 228 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 PDCD6IPQ8WUM4 868 aaKnown RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 FGF13Q92913 245 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 FAM111AQ96PZ2 611 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 TM6SF2Q9BZW4 377 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 FAM107BQ9H098 131 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 MAGEE1Q9HCI5 957 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 SLC17A7Q9P2U7 560 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 EVLQ9UI08 416 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 FBXO10Q9UK96 956 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 TLK1Q9UKI8 766 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 CORO1CQ9ULV4 474 aaPredicted RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 MTO1Q9Y2Z2 717 aaKnown RBP13.84□□□□□ -0.19
TPM1-215ENST00000558868 PCDHB9Q9Y5E1 797 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 ATG2AQ2TAZ0 1938 aa13.84□□□□□ -0.19
TPM1-215ENST00000558868 TMEM265A0A087WTH1 108 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 EBAG9O00559 213 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 BIRC5O15392 142 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 HTRA2O43464 458 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 POP4O95707 220 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 CYP17A1P05093 508 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ATP5BP06576 529 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 PDHA1P08559 390 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 COL6A2P12110 1019 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 TAC1P20366 129 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 OGNP20774 298 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 SLC1A2P43004 574 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ETV4P43268 484 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 RECQLP46063 649 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 ZNF140P52738 457 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 SLC12A2P55011 1212 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 POU4F1Q01851 419 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 DMTNQ08495 405 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 HYAL1Q12794 435 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 CTBP1Q13363 440 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 PDE1CQ14123 709 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 USP10Q14694 798 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 SMAD1Q15797 465 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 MYLK3Q32MK0 819 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 CCDC153Q494R4 210 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 CARD16Q5EG05 197 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ATAT1Q5SQI0 421 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ASTLQ6HA08 431 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 CES5AQ6NT32 575 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 AFTPHQ6ULP2 937 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 GET4Q7L5D6 327 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 TSPAN17Q96FV3 270 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 DNAJC1Q96KC8 554 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 NSMCE3Q96MG7 304 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ZNF641Q96N77 438 aaPredicted RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 CPEB1Q9BZB8 566 aaKnown RBP13.83□□□□□ -0.2
TPM1-215ENST00000558868 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 GGT7Q9UJ14 662 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 MID2Q9UJV3 735 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 CDH7Q9ULB5 785 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 SLC39A10Q9ULF5 831 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 VPS9D1Q9Y2B5 631 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 ARL5AQ9Y689 179 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 MYO7AQ13402 2215 aa13.83□□□□□ -0.2
TPM1-215ENST00000558868 MYLKQ15746 1914 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 FAM95CA0A1B0GW59 222 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 ERICH4A6NGS2 130 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 HEPACAM2A8MVW5 462 aa13.82□□□□□ -0.2
TPM1-215ENST00000558868 STX7O15400 261 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 CD3EAPO15446 510 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 GOT2P00505 430 aaKnown RBP13.82□□□□□ -0.2
TPM1-215ENST00000558868 APOA4P06727 396 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms