RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 NSUN2Q08J23 767 aaKnown RBP eCLIP20.73■□□□□ 0.91
HIF1A-206ENST00000553999 PTK2BQ14289 1009 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 PAFAH1B3Q15102 231 aaKnown RBP20.73■□□□□ 0.91
HIF1A-206ENST00000553999 PDK2Q15119 407 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 CDKN3Q16667 212 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 SARM1Q6SZW1 724 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 ENPP7Q6UWV6 458 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 NPNTQ6UXI9 565 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 LIPIQ6XZB0 460 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 MAP7D3Q8IWC1 876 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 PELI3Q8N2H9 469 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 GALNT15Q8N3T1 639 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 TC2NQ8N9U0 490 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 FAM174AQ8TBP5 190 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 HCAR2Q8TDS4 363 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 LRRC61Q9BV99 259 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 CEP41Q9BYV8 373 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 NLGN3Q9NZ94 848 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 RALYQ9UKM9 306 aaKnown RBP20.73■□□□□ 0.91
HIF1A-206ENST00000553999 HEY1Q9Y5J3 304 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 IGF2RP11717 2491 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 EPG5Q9HCE0 2579 aa20.73■□□□□ 0.91
HIF1A-206ENST00000553999 SPEGQ15772 3267 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 CPED1A4D0V7 1026 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 GCATO75600 419 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 ALPIP09923 528 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 MAN1A1P33908 653 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 HSPA9P38646 679 aaKnown RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 NOP2P46087 812 aaKnown RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 SLC10A2Q12908 348 aaPredicted RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 SMAD1Q15797 465 aaKnown RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 CNGA3Q16281 694 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 MACC1Q6ZN28 852 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 TSPAN33Q86UF1 283 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 RFX6Q8HWS3 928 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 KDF1Q8NAX2 398 aaPredicted RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.72■□□□□ 0.91
HIF1A-206ENST00000553999 APOOQ9BUR5 198 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 SLC13A1Q9BZW2 595 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 RBM22Q9NW64 420 aaKnown RBP eCLIP20.72■□□□□ 0.914e-17■■■■■ 32
HIF1A-206ENST00000553999 SIRPGQ9P1W8 387 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 MOSPD1Q9UJG1 213 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 RAI2Q9Y5P3 530 aa20.72■□□□□ 0.91
HIF1A-206ENST00000553999 FAM221BA6H8Z2 402 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 TRABD2BA6NFA1 517 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 NEMP2A6NFY4 417 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 NPIPB15A6NHN6 443 aaPredicted RBP20.71■□□□□ 0.91
HIF1A-206ENST00000553999 SPOPO43791 374 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 HLA-DQB2P05538 268 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 PDHA1P08559 390 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 GM2AP17900 193 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 ZNF75DP51815 510 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 POLR2LP62875 67 aaKnown RBP20.71■□□□□ 0.91
HIF1A-206ENST00000553999 PPARDQ03181 441 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 ALG11Q2TAA5 492 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 ODF2Q5BJF6 829 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 RHOT2Q8IXI1 618 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 IFT43Q96FT9 208 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 PDXPQ96GD0 296 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 LGMNQ99538 433 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 IL12RB2Q99665 862 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 CCDC86Q9H6F5 360 aaKnown RBP20.71■□□□□ 0.91
HIF1A-206ENST00000553999 SYNDIG1Q9H7V2 258 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 SEPT10Q9P0V9 454 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 SPASTQ9UBP0 616 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 KLQ9UEF7 1012 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 PCDHGA1Q9Y5H4 931 aa20.71■□□□□ 0.91
HIF1A-206ENST00000553999 USP24Q9UPU5 2620 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 LY6G6EA0A0G2JKS1 128 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 KCNK1O00180 336 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 TAF4O00268 1085 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 HTRA2O43464 458 aaPredicted RBP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 SOCS5O75159 536 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 TSHRP16473 764 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 COMTP21964 271 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 LHCGRP22888 699 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 VIPR1P32241 457 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 HNF1BP35680 557 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 MAGEA1P43355 309 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 CYP4F3Q08477 520 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 TARDBPQ13148 414 aaKnown RBP eCLIP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 NFATC4Q14934 902 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 IFI16Q16666 785 aaKnown RBP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 ARMC12Q5T9G4 340 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 HSD11B1LQ7Z5J1 315 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 FAF2Q96CS3 445 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 NUS1Q96E22 293 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 ZNF830Q96NB3 372 aaPredicted RBP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 RNF157Q96PX1 679 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 POLR1EQ9GZS1 481 aaKnown RBP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 CLPBQ9H078 707 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 MRPL40Q9NQ50 206 aaKnown RBP20.7■□□□□ 0.9
HIF1A-206ENST00000553999 DTLQ9NZJ0 730 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 CD84Q9UIB8 345 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 DOLKQ9UPQ8 538 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 CHKBQ9Y259 395 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 U3KQA8 63 aa20.7■□□□□ 0.9
HIF1A-206ENST00000553999 TMEM8BA6NDV4 472 aa20.69■□□□□ 0.9
HIF1A-206ENST00000553999 SRRM3A6NNA2 597 aaPredicted RBP20.69■□□□□ 0.9
HIF1A-206ENST00000553999 APOL1O14791 398 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms