RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 NPWQ8N729 165 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 BTN2A2Q8WVV5 523 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 ARHGEF26Q96DR7 871 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 LIN37Q96GY3 246 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 FUCA2Q9BTY2 467 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 SPASTQ9UBP0 616 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 UBA2Q9UBT2 640 aaPredicted RBP11.96□□□□□ -0.49
GABPB1-206ENST00000543881 COQ6Q9Y2Z9 468 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 PCDHGA7Q9Y5G6 932 aa11.96□□□□□ -0.49
GABPB1-206ENST00000543881 DOPEY2Q9Y3R5 2298 aa11.96□□□□□ -0.5
GABPB1-206ENST00000543881 A0A1W2PQC6 194 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 SMTNL1A8MU46 457 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 EEF2KO00418 725 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NOBOXO60393 691 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 GCATO75600 419 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TM7SF2O76062 418 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 FAM87AP0C7U9 286 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 GZMAP12544 262 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ERCC2P18074 760 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 MIPP30301 263 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ZNF165P49910 485 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 SRSF6Q13247 344 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 C1orf61Q13536 156 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NR1I3Q14994 352 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TMEM52BQ4KMG9 183 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ARHGAP36Q6ZRI8 547 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 RFX8Q6ZV50 586 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 JAMLQ86YT9 394 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TP53INP2Q8IXH6 220 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 FBXO39Q8N4B4 442 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TSEN2Q8NCE0 465 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 CXorf40AQ8TE69 158 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NSMCE3Q96MG7 304 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 SUV39H2Q9H5I1 410 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 EPB41L5Q9HCM4 733 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 CNOT8Q9UFF9 292 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 APOBEC3BQ9UH17 382 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 LRRK1Q38SD2 2015 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 AHCTF1Q8WYP5 2266 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NTN3O00634 580 aaPredicted RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 LRCH4O75427 683 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 PRKCGP05129 697 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ANXA6P08133 673 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 SFTPCP11686 197 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 TCF4P15884 667 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 DESP17661 470 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 UGT1A5P35504 534 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 INHBCP55103 352 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ADKP55263 362 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 KLHL30Q0D2K2 578 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 IRF4Q15306 451 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 UGP2Q16851 508 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 WSCD2Q2TBF2 565 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 FILIP1LQ4L180 1135 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 PRRT3Q5FWE3 981 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 PPP1R2P3Q6NXS1 205 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NYAP1Q6ZVC0 841 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 RAB11FIP2Q7L804 512 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 B3GNT8Q7Z7M8 397 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 CAMK1DQ8IU85 385 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 HCAR2Q8TDS4 363 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 FNIP1Q8TF40 1166 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 UBE2Q2Q8WVN8 375 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 PCDH12Q9NPG4 1184 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 CWC15Q9P013 229 aaKnown RBP11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ACSL6Q9UKU0 697 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 PADI4Q9UM07 663 aa11.95□□□□□ -0.5
GABPB1-206ENST00000543881 ARHGAP42A6NI28 874 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 EIF3CLB5ME19 914 aaKnown RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 LMO7DNF2Z398 122 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 YY2O15391 372 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 RNF8O76064 485 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 IL1R2P27930 398 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 EIF4A3P38919 411 aaKnown RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 THOP1P52888 689 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 YPEL5P62699 121 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 EIF3IQ13347 325 aaKnown RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 DPYSQ14117 519 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 PTK2BQ14289 1009 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 PPP6R3Q5H9R7 873 aaPredicted RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 ESRP1Q6NXG1 681 aaKnown RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 MACC1Q6ZN28 852 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 SRLQ86TD4 932 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 PHACTR4Q8IZ21 702 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 EIF3CQ99613 913 aaKnown RBP11.94□□□□□ -0.5
GABPB1-206ENST00000543881 SEMA3CQ99985 751 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 LRRC61Q9BV99 259 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 SLC13A1Q9BZW2 595 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 CLPBQ9H078 707 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 ISCUQ9H1K1 167 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 MYO1AQ9UBC5 1043 aa11.94□□□□□ -0.5
GABPB1-206ENST00000543881 TMX2-CTNND1H3BSU7 103 aa11.93□□□□□ -0.5
GABPB1-206ENST00000543881 DAPK3O43293 454 aa11.93□□□□□ -0.5
GABPB1-206ENST00000543881 PRPSAP2O60256 369 aa11.93□□□□□ -0.5
GABPB1-206ENST00000543881 PALMO75781 387 aa11.93□□□□□ -0.5
GABPB1-206ENST00000543881 NTRK1P04629 796 aa11.93□□□□□ -0.5
GABPB1-206ENST00000543881 CELA2BP08218 269 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms