RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 IGSF5Q9NSI5 407 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 GIMAP2Q9UG22 337 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 RAP2CQ9Y3L5 183 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 PTGDR2Q9Y5Y4 395 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 BMP1P13497 986 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 CHN2P52757 468 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 SLC12A2P55011 1212 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 SFSWAPQ12872 951 aaKnown RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 MAPRE1Q15691 268 aaKnown RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 SIRPB2Q5JXA9 342 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 GPR158Q5T848 1215 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 AAGABQ6PD74 315 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 ZNF683Q8IZ20 524 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 C2CD4AQ8NCU7 369 aaPredicted RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 OR13C4Q8NGS5 318 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 ABTB1Q969K4 478 aaPredicted RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 CMTM5Q96DZ9 223 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 SLC39A13Q96H72 371 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 TBATAQ96M53 351 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 NSMCE3Q96MG7 304 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 C1orf21Q9H246 121 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 DOCK4Q8N1I0 1966 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 CCDC160A6NGH7 325 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 C9JVG2 144 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 CDH13P55290 713 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 DUSP4Q13115 394 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 TBCCQ15814 346 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 AFMIDQ63HM1 303 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 KLC3Q6P597 504 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 TRAF7Q6Q0C0 670 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 PRSS55Q6UWB4 352 aaPredicted RBP14.85□□□□□ -0.03
DDX55-209ENST00000542286 B3GNT6Q6ZMB0 384 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 RNF19BQ6ZMZ0 732 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 GK5Q6ZS86 529 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 CDRT15Q96T59 188 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 ALG9Q9H6U8 611 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 ENTPD7Q9NQZ7 604 aa14.85□□□□□ -0.03
DDX55-209ENST00000542286 TMEM114B3SHH9 223 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 CA12O43570 354 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 CABYRO75952 493 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 RAG1P15918 1043 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 SERPINH1P50454 418 aaKnown RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 THOP1P52888 689 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 NME5P56597 212 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 C1QTNF8P60827 252 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 DSC1Q08554 894 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 C1QTNF12Q5T7M4 302 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 PGM2L1Q6PCE3 622 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 MON1AQ86VX9 555 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 KDM1BQ8NB78 822 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 GDPD5Q8WTR4 605 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 TMA16Q96EY4 203 aaKnown RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 FAM193BQ96PV7 902 aaPredicted RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 SEMA3CQ99985 751 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 ZYG11BQ9C0D3 744 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 MARCH2Q9P0N8 246 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 TLR6Q9Y2C9 796 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 ADAM12O43184 909 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 VNN2O95498 520 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 XRCC1P18887 633 aaPredicted RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 NSUN2Q08J23 767 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDX55-209ENST00000542286 SEMA3AQ14563 771 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 TCTN1Q2MV58 587 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 RTP2Q5QGT7 225 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 NADSYN1Q6IA69 706 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 POTEHQ6S545 545 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 UGT2A3Q6UWM9 527 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 CNTN4Q8IWV2 1026 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 ACTRT2Q8TDY3 377 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 IMP4Q96G21 291 aaKnown RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 PRICKLE1Q96MT3 831 aaPredicted RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 SIKE1Q9BRV8 207 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 SLC25A51Q9H1U9 297 aa14.84□□□□□ -0.03
DDX55-209ENST00000542286 PRDM5Q9NQX1 630 aaPredicted RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 GMPR2Q9P2T1 348 aaKnown RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 COPG1Q9Y678 874 aaKnown RBP14.84□□□□□ -0.03
DDX55-209ENST00000542286 TYMPP19971 482 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 OR1E1P30953 314 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 CYP2C18P33260 490 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 SLC24A5Q71RS6 500 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 PCDH20Q8N6Y1 951 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 OR7D4Q8NG98 312 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 MRPL46Q9H2W6 279 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 STN1Q9H668 368 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 FBRSL1Q9HCM7 1045 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 RGS18Q9NS28 235 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 ARHGAP26Q9UNA1 814 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 SCML2Q9UQR0 700 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 HNRNPCP07910 306 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX55-209ENST00000542286 YWHAQP27348 245 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 ADARP55265 1226 aaKnown RBP14.83□□□□□ -0.04
DDX55-209ENST00000542286 MS4A2Q01362 244 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 TMED1Q13445 227 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 MAP3K21Q5TCX8 1036 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 KLHDC10Q6PID8 442 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 LAYNQ6UX15 382 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 DSELQ8IZU8 1212 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 FBXW8Q8N3Y1 598 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 LZTR1Q8N653 840 aa14.83□□□□□ -0.04
DDX55-209ENST00000542286 OR9I1Q8NGQ6 314 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms