RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ABHD8Q96I13 439 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ZNF300Q96RE9 604 aaPredicted RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 PRPF18Q99633 342 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 SYT11Q9BT88 431 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 POLR3CQ9BUI4 534 aaPredicted RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 TP63Q9H3D4 680 aaPredicted RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 FGF22Q9HCT0 170 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 SLC52A3Q9NQ40 469 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CYSLTR2Q9NS75 346 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ATP8A2Q9NTI2 1148 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 SPATS2LQ9NUQ6 558 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 C2orf42Q9NWW7 574 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 MCM9Q9NXL9 1143 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 BARHL2Q9NY43 387 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GOLGA6AQ9NYA3 693 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 MAP3K20Q9NYL2 800 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 C1RLQ9NZP8 487 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 NDRG3Q9UGV2 375 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 LZTS1Q9Y250 596 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 MRPS28Q9Y2Q9 187 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 DAAM1Q9Y4D1 1078 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CLDN16Q9Y5I7 305 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CSAG2Q9Y5P2 127 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 IGLV5-45A0A087WSX0 123 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TYW5A2RUC4 315 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A18PA6NE21 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A16PA6NEW6 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A9PA6NNJ1 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A5PA8MXJ8 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 VSTM5A8MXK1 200 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 KLLNB2CW77 178 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PRKNO60260 465 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 CIDEAO60543 219 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 NDUFB4O95168 129 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SERPINC1P01008 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A15PP0C7V4 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM90A14PP0C7W9 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 LYL1P12980 280 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ITGA2P17301 1181 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 S1PR1P21453 382 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 AVPR2P30518 371 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 HOXA13P31271 388 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 CEACAM8P31997 349 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 GJC1P36383 396 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PTGER3P43115 390 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 MTNR1AP48039 350 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PRIM2P49643 509 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ARSFP54793 590 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ARHGAP8P85298 464 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PDE1BQ01064 536 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SLC18A2Q05940 514 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TBX2Q13207 712 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 ITGADQ13349 1161 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TUBB2AQ13885 445 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 GTF2H2Q13888 395 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 GBX1Q14549 363 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 RPS6KA2Q15349 733 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 RPE65Q16518 533 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 BTBD16Q32M84 506 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 GFOD2Q3B7J2 385 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PPP6R3Q5H9R7 873 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 FAM209BQ5JX69 171 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SIRPB2Q5JXA9 342 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SLC25A30Q5SVS4 291 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 STXBP5Q5T5C0 1151 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ATPAF1Q5TC12 328 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 GTF2H2CQ6P1K8 395 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ZNF343Q6P1L6 599 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ZNF613Q6PF04 617 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 B3GNT6Q6ZMB0 384 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ASB18Q6ZVZ8 466 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TRPT1Q86TN4 253 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 ADIPOR2Q86V24 386 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 LURAP1LQ8IV03 231 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 CHERPQ8IWX8 916 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 LMNTD2Q8IXW0 634 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 ZNF34Q8IZ26 560 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 C1orf87Q8N0U7 546 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PTGR2Q8N8N7 351 aaPredicted RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 OR2T6Q8NHC8 308 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SLC2A12Q8TD20 617 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 PARD3BQ8TEW8 1205 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 NCSTNQ92542 709 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 RND1Q92730 232 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TTC17Q96AE7 1141 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 AGAP3Q96P47 875 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TBCBQ99426 244 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TUBB2BQ9BVA1 445 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 CLPBQ9H078 707 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 TFB2MQ9H5Q4 396 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 C17orf75Q9HAS0 396 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 SEPSECSQ9HD40 501 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 THAP1Q9NVV9 213 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 CLIP2Q9UDT6 1046 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 CACNG5Q9UF02 275 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 EXOGQ9Y2C4 368 aaKnown RBP0.78□□□□□ -2.28
COPB1-212ENST00000534771 NFE2L3Q9Y4A8 694 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 DISP3Q9P2K9 1392 aa0.78□□□□□ -2.28
COPB1-212ENST00000534771 IGLV3-10A0A075B6K4 115 aa0.77□□□□□ -2.29
COPB1-212ENST00000534771 CTAGE9A4FU28 777 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms