RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 NFE2L3Q9Y4A8 694 aa3.44□□□□□ -1.86
HMGB1P29-201ENST00000505659 CYSRT1A8MQ03 144 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 TEX22C9J3V5 150 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF587BE7ETH6 402 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 MID1O15344 667 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 PLRG1O43660 514 aaKnown RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 NDUFB4O95168 129 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 POLBP06746 335 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 HEXAP06865 529 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 G6PDP11413 515 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 PCNAP12004 261 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 POU1F1P28069 291 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 CDH15P55291 814 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF155Q12901 538 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 ITGADQ13349 1161 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 VEPH1Q14D04 833 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 TAF11Q15544 211 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 EIF2S3LQ2VIR3 472 aaKnown RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SGO1Q5FBB7 561 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 NEK10Q6ZWH5 1172 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 MTSS1LQ765P7 747 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SATL1Q86VE3 508 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 NAGSQ8N159 534 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 TNIP2Q8NFZ5 429 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 NR4A3Q92570 626 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 TANKQ92844 425 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF385AQ96PM9 386 aaKnown RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 HAUS8Q9BT25 410 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 GLIS2Q9BZE0 524 aaPredicted RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 GPR63Q9BZJ6 419 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SPRY4Q9C004 299 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 INTS2Q9H0H0 1204 aaKnown RBP3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 TKTL2Q9H0I9 626 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SMYD2Q9NRG4 433 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 GGA3Q9NZ52 723 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SMARCAL1Q9NZC9 954 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 C1RLQ9NZP8 487 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 SIX4Q9UIU6 781 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 PCDHAC2Q9Y5I4 1007 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 DGKBQ9Y6T7 804 aa3.43□□□□□ -1.86
HMGB1P29-201ENST00000505659 IGHV4OR15-8A0A075B7B6 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 A0A0B4J293 547 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 BMPR1BO00238 502 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 LDLRAD4O15165 306 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 KRT36O76013 467 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE7O76087 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPA1P09651 372 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE12FP0CL80 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE12GP0CL81 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE12IP0CL82 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 DGKAP23743 735 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 CHATP28329 748 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 POU3F1Q03052 451 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE1Q13065 139 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAGE4Q13068 117 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TNFAIP1Q13829 316 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TAF12Q16514 161 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 ATP13A5Q4VNC0 1218 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 UNQ6126/PRO20091Q6UXV3 157 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 C9orf139Q6ZV77 190 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TUBA1AQ71U36 451 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TMPRSS12Q86WS5 348 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TMTC1Q8IUR5 882 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 ANKRD18AQ8IVF6 992 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 ODF3L1Q8IXM7 274 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZBTB8BQ8NAP8 495 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 OTULINQ96BN8 352 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 FBXL8Q96CD0 374 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 GCC1Q96CN9 775 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TMEM19Q96HH6 336 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 MAELQ96JY0 434 aaKnown RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 UBXN10Q96LJ8 280 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 TUBA1CQ9BQE3 449 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 CSTL1Q9H114 145 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 KCNN2Q9H2S1 579 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 EVA1AQ9H8M9 152 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 CNGB3Q9NQW8 809 aa3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 BEX4Q9NWD9 120 aaPredicted RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 CNOT7Q9UIV1 285 aaKnown RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 LSM4Q9Y4Z0 139 aaKnown RBP3.42□□□□□ -1.86
HMGB1P29-201ENST00000505659 WDR81Q562E7 1941 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 A0A0G2JPF8 293 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 GOLGA6L10A0A0M3HER8 536 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPCL3B7ZW38 293 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 SNAP23O00161 211 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 LMX1BO60663 402 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPCL1O60812 293 aaKnown RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 GAS8-AS1O95177 125 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 HNRNPCL4P0DMR1 293 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 AMD1P17707 334 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 AGAP20933 346 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 TCEA1P23193 301 aaKnown RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 STX2P32856 288 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 SHMT1P34896 483 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 PSMC2P35998 433 aaKnown RBP3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 GPD2P43304 727 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 FUT6P51993 359 aa3.41□□□□□ -1.86
HMGB1P29-201ENST00000505659 ZNF132P52740 706 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms