RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 RPS6KL1Q9Y6S9 549 aa5.62□□□□□ -1.51
SSR3-208ENST00000496050 A0A0G2JK05 382 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 A8MZ25 164 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 AKR1B15C9JRZ8 316 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 ADAM10O14672 748 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 HCRTR2O43614 444 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 RGS11O94810 467 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CLDN7O95471 211 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 RB1P06400 928 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CBSLP0DN79 551 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 IL7RP16871 459 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CHRNB2P17787 502 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 SAT1P21673 171 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CD38P28907 300 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CBSP35520 551 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 PIK3CAP42336 1068 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 PPP3CCP48454 512 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 IFI35P80217 286 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 SORDQ00796 357 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TFAP4Q01664 338 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CALD1Q05682 793 aaKnown RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 IRF3Q14653 427 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 ADIPOQQ15848 244 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 SGO1Q5FBB7 561 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 CXorf66Q5JRM2 361 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 SLC2A7Q6PXP3 512 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 LCTLQ6UWM7 567 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TRILQ7L0X0 811 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 LINGO2Q7L985 606 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TRAPPC11Q7Z392 1133 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 PATL1Q86TB9 770 aaKnown RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 NOXA1Q86UR1 476 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 WDR63Q8IWG1 891 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 PARP16Q8N5Y8 322 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 BEST2Q8NFU1 509 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 C16orf52Q8NHV5 167 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 HUS1BQ8NHY5 278 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 PIGOQ8TEQ8 1089 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 ZKSCAN4Q969J2 545 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 COQ8BQ96D53 544 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 SAT2Q96F10 170 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 VCPIP1Q96JH7 1222 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TEX12Q9BXU0 123 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 KRTAP9-9Q9BYP9 154 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 KRTAP9-4Q9BYQ2 154 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TMPRSS5Q9H3S3 457 aa5.61□□□□□ -1.51
SSR3-208ENST00000496050 TUBA8Q9NY65 449 aaPredicted RBP5.61□□□□□ -1.51
SSR3-208ENST00000496050 HS6ST1O60243 411 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 GJB3O75712 270 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 NDUFB4O95168 129 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 CYP19A1P11511 503 aaPredicted RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 HOXA13P31271 388 aaPredicted RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 NNMTP40261 264 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 EIF2DP41214 584 aaKnown RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 RASSF2P50749 326 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 MRPL12P52815 198 aaKnown RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 GALCP54803 685 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 NEDD9Q14511 834 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 Q4G0T1 1027 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 WASHC2DQ5SRD0 308 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 ASPHD1Q5U4P2 390 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 FBXO46Q6PJ61 603 aaPredicted RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 PARM1Q6UWI2 310 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 HAPLN4Q86UW8 402 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 RNF168Q8IYW5 571 aaPredicted RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 ZBTB2Q8N680 514 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 GABPB2Q8TAK5 448 aaPredicted RBP5.6□□□□□ -1.51
SSR3-208ENST00000496050 SLC41A2Q96JW4 573 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 FAM110AQ9BQ89 295 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 TMEM47Q9BQJ4 181 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 CENPOQ9BU64 300 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 TKTL2Q9H0I9 626 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 FBXL17Q9UF56 701 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 ERVK-11Q9UQG0 969 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 HS3ST3B1Q9Y662 390 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 MAU2Q9Y6X3 613 aa5.6□□□□□ -1.51
SSR3-208ENST00000496050 FAM90A8PA6NJQ4 464 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 P4HA2O15460 535 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 NDUFB8O95169 186 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 FGBP02675 491 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 FAM90A13PP0C7W8 464 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 FAM90A24PP0C7X0 464 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 CD58P19256 250 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 CHATP28329 748 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 DCTDP32321 178 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 MMP13P45452 471 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 ME1P48163 572 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 ZBED6P86452 979 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 ST3GAL1Q11201 340 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 NAE1Q13564 534 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 BECN1Q14457 450 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 DUSP6Q16828 381 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 GPR139Q6DWJ6 353 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 KRT74Q7RTS7 529 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 SFTPA2Q8IWL1 248 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 MB21D2Q8IYB1 491 aaPredicted RBP5.59□□□□□ -1.51
SSR3-208ENST00000496050 POC5Q8NA72 575 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 SCCPDHQ8NBX0 429 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 LPAR1Q92633 364 aa5.59□□□□□ -1.51
SSR3-208ENST00000496050 SEPT5Q99719 369 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms