RNA–Protein interactions for RNA: ENST00000493016.1

TSC22D1-208, Transcript of TSC22 domain family member 1, humanhuman

TSL 4

Gene TSC22D1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-208ENST00000493016 LSMEM2Q8N112 164 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 PAF1Q8N7H5 531 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 ATL2Q8NHH9 583 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 NAT6Q93015 286 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 TSACCQ96A04 125 aaPredicted RBP16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 ZNF578Q96N58 590 aaPredicted RBP16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 ZNF599Q96NL3 588 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 POLR1BQ9H9Y6 1135 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 SEPT3Q9UH03 358 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 DOLKQ9UPQ8 538 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 OR1A2Q9Y585 309 aa16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 BZW2Q9Y6E2 419 aaKnown RBP16.42■□□□□ 0.22
TSC22D1-208ENST00000493016 A0A1W2PQJ5 194 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 DXOO77932 396 aaKnown RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 PCCBP05166 539 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 TPM3P06753 285 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 CELA2BP08218 269 aaPredicted RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 ALPIP09923 528 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 CTSEP14091 401 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 TCF4P15884 667 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 AMPD1P23109 780 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 PBX1P40424 430 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 SRP54P61011 504 aaKnown RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 SLC10A7Q0GE19 358 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 PIGHQ14442 188 aaPredicted RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 ESRP1Q6NXG1 681 aaKnown RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 LVRNQ6Q4G3 990 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 LIPIQ6XZB0 460 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 DPPA4Q7L190 304 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 POLNQ7Z5Q5 900 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 SDR16C5Q8N3Y7 309 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 SCG3Q8WXD2 468 aaKnown RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 HSPH1Q92598 858 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 SYN2Q92777 582 aaPredicted RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 GRAMD1AQ96CP6 724 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 NSMCE3Q96MG7 304 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 WDR92Q96MX6 357 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 BBC3Q96PG8 261 aaPredicted RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 TSPY26PQ9H489 355 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 ETNK2Q9NVF9 386 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 KLQ9UEF7 1012 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 PADI4Q9UM07 663 aa16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
TSC22D1-208ENST00000493016 BPTFQ12830 3046 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 TCEA3O75764 348 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 RECQL5O94762 991 aaPredicted RBP16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 ELFN1P0C7U0 828 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 RARAP10276 462 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 PCBP4P57723 403 aaKnown RBP16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 ZBED6P86452 979 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 CCDC173Q0VFZ6 552 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 ZNF235Q14590 738 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 CRTC1Q6UUV9 634 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 RBM44Q6ZP01 1051 aaKnown RBP16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 RD3Q7Z3Z2 195 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 GKN2Q86XP6 184 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 PLA2G15Q8NCC3 412 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 PCDH19Q8TAB3 1148 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 WDR48Q8TAF3 677 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 TEKT4Q8WW24 435 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 SPOCK2Q92563 424 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 CSPG4P5Q96PW8 444 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 XPO4Q9C0E2 1151 aaKnown RBP16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 PRORYQ9H606 182 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 CAPN11Q9UMQ6 739 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 ENTPD2Q9Y5L3 495 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 RAI2Q9Y5P3 530 aa16.4■□□□□ 0.22
TSC22D1-208ENST00000493016 PEX11BO96011 259 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 SERPING1P05155 500 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 HSPA9P38646 679 aaKnown RBP16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 KIAA1024LP59773 190 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 ERVPABLB-1P60509 514 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 TCEA2Q15560 299 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 NFKBIBQ15653 356 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 TXNRD3NBQ6F5E7 133 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 NYAP1Q6ZVC0 841 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 SPACA3Q8IXA5 215 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 ARL10Q8N8L6 244 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 NIPA2Q8N8Q9 360 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 ZNF248Q8NDW4 579 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 IQCDQ96DY2 449 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 PDXPQ96GD0 296 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 ATXN7L3BQ96GX2 97 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 HIC2Q96JB3 615 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 LGMNQ99538 433 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 CCDC3Q9BQI4 270 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 THAP2Q9H0W7 228 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 GULP1Q9UBP9 304 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 IP6K2Q9UHH9 426 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 SATB2Q9UPW6 733 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 DGKBQ9Y6T7 804 aa16.39■□□□□ 0.21
TSC22D1-208ENST00000493016 A0A1W2PQ67 120 aa16.38■□□□□ 0.21
TSC22D1-208ENST00000493016 TTC24A2A3L6 582 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-208ENST00000493016 A8MX80 341 aa16.38■□□□□ 0.21
TSC22D1-208ENST00000493016 CACNB4O00305 520 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-208ENST00000493016 HTRA2O43464 458 aaPredicted RBP16.38■□□□□ 0.21
TSC22D1-208ENST00000493016 MAFKO60675 156 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms