RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CEP44Q9C0F1 390 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 MTG2Q9H4K7 406 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 TMEM74BQ9NUR3 256 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 SCML1Q9UN30 329 aa13.38□□□□□ -0.27
BRAT1-205ENST00000473879 GOLGA8MH3BSY2 632 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 RNASEH1O60930 286 aaKnown RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 ZNF821O75541 412 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 IGSF6O95976 241 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SERPINF2P08697 491 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 CA4P22748 312 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 MAPK8P45983 427 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 STK19P49842 368 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 DSC2Q02487 901 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 DHX9Q08211 1270 aaKnown RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 BEND6Q5SZJ8 279 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 FAM182AQ5T1J6 154 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SYCP2LQ5T4T6 812 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 KCTD11Q693B1 232 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 TCEAL6Q6IPX3 200 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SLC23A3Q6PIS1 610 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 ERMP1Q7Z2K6 904 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 TMC3Q7Z5M5 1100 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 RABEPKQ7Z6M1 372 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 MREGQ8N565 214 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SH2D3CQ8N5H7 860 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SPATA22Q8NHS9 363 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 CEP76Q8TAP6 659 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 PTPRN2Q92932 1015 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 TCEAL3Q969E4 200 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 ISG20Q96AZ6 181 aaKnown RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 OXNAD1Q96HP4 312 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SERPINB12Q96P63 405 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 NUDCD1Q96RS6 583 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SEMA3CQ99985 751 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 GORASP1Q9BQQ3 440 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 MLPHQ9BV36 600 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 GPR174Q9BXC1 333 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 PCED1AQ9H1Q7 454 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 SCUBE2Q9NQ36 999 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 RXFP3Q9NSD7 469 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 FCF1Q9Y324 198 aaKnown RBP13.37□□□□□ -0.27
BRAT1-205ENST00000473879 ACTL7AQ9Y615 435 aa13.37□□□□□ -0.27
BRAT1-205ENST00000473879 LNP1A1A4G5 178 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 METTL12A8MUP2 240 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 PATE3B3GLJ2 98 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 MUSKO15146 869 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 INSIG1O15503 277 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 SRCP12931 536 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 CR2P20023 1033 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 CD86P42081 329 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 CSNK1DP48730 415 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 AP1S1P61966 158 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 IRX4P78413 519 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 SFSWAPQ12872 951 aaKnown RBP13.36□□□□□ -0.27
BRAT1-205ENST00000473879 CBLBQ13191 982 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 DUOXA1Q1HG43 343 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
BRAT1-205ENST00000473879 TRIM61Q5EBN2 209 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 WDR45BQ5MNZ6 344 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 C22orf39Q6P5X5 142 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 USP30Q70CQ3 517 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 DGLUCYQ7Z3D6 616 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 CACUL1Q86Y37 369 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 RELL1Q8IUW5 271 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.36□□□□□ -0.27
BRAT1-205ENST00000473879 PCDH20Q8N6Y1 951 aaKnown RBP13.36□□□□□ -0.27
BRAT1-205ENST00000473879 IPMKQ8NFU5 416 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 ARRDC2Q8TBH0 407 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 DNASE2BQ8WZ79 361 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 GDAP1L1Q96MZ0 367 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 FAM129BQ96TA1 746 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 TBL1YQ9BQ87 522 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 EDEM2Q9BV94 578 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 NUSAP1Q9BXS6 441 aaKnown RBP13.36□□□□□ -0.27
BRAT1-205ENST00000473879 SAYSD1Q9NPB0 183 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 UBP1Q9NZI7 540 aa13.36□□□□□ -0.27
BRAT1-205ENST00000473879 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 E7ESA3 106 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 PMPCBO75439 489 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 MT-CYBP00156 380 aaPredicted RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 GSRP00390 522 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 MT-CO1P00395 513 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 SCNN1BP51168 640 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 PMS2P54278 862 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 WNT3AP56704 352 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 SNRPD1P62314 119 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 SKOR1P84550 965 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 NIPAL4Q0D2K0 466 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 CDH17Q12864 832 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 PDIA2Q13087 525 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 ELAVL3Q14576 367 aaKnown RBP13.35□□□□□ -0.27
BRAT1-205ENST00000473879 CST6Q15828 149 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 BBS9Q3SYG4 887 aa13.35□□□□□ -0.27
BRAT1-205ENST00000473879 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms