RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TIGD5Q53EQ6 642 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 XKR4Q5GH76 650 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FIGNQ5HY92 759 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RTP2Q5QGT7 225 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 THOC7Q6I9Y2 204 aaKnown RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 JADE1Q6IE81 842 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 NEPROQ6NW34 567 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FUT10Q6P4F1 479 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 WDR73Q6P4I2 378 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 PRSS55Q6UWB4 352 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 OLFML1Q6UWY5 402 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 CCBE1Q6UXH8 406 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ALKAL1Q6UXT8 129 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 STXBP4Q6ZWJ1 553 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 H1FNTQ75WM6 255 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RNF44Q7L0R7 432 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RRAGAQ7L523 313 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 IL22RA1Q8N6P7 574 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 MFSD2AQ8NA29 543 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 VN1R2Q8NFZ6 395 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 SCAMP5Q8TAC9 235 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FEZF2Q8TBJ5 459 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 BCAS4Q8TDM0 211 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 SH3RF2Q8TEC5 729 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 NSMCE1Q8WV22 266 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 MAIP1Q8WWC4 291 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 KRT35Q92764 455 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FATE1Q969F0 183 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RAB24Q969Q5 203 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ISL2Q96A47 359 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 LRRC45Q96CN5 670 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 EEF2KMTQ96G04 330 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 MRGPRX1Q96LB2 322 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RUNDC3BQ96NL0 473 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM175Q9BSA9 504 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ADI1Q9BV57 179 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 GPR62Q9BZJ7 368 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ADAM7Q9H2U9 754 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 NDST4Q9H3R1 872 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 NSUN3Q9H649 340 aaKnown RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RPF1Q9H9Y2 349 aaKnown RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 BRF2Q9HAW0 419 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FANCFQ9NPI8 374 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 DECR2Q9NUI1 292 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 GALNT8Q9NY28 637 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 RBAKQ9NYW8 714 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 HSPBP1Q9NZL4 362 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 FRRS1LQ9P0K9 344 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ZMAT5Q9UDW3 170 aaKnown RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.65□□□□□ -1.67
SF3B1-202ENST00000409915 CDH22Q9UJ99 828 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 MAN1B1Q9UKM7 699 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 ADAM28Q9UKQ2 775 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 TMPRSS11EQ9UL52 423 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 CAMK2AQ9UQM7 478 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 SH3GLB1Q9Y371 365 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 PCDHA5Q9Y5H7 936 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 PSAT1Q9Y617 370 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 STYXL1Q9Y6J8 313 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 UBE4BO95155 1302 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 PTPRJQ12913 1337 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 C5orf42Q9H799 3197 aa4.65□□□□□ -1.67
SF3B1-202ENST00000409915 BRWD1Q9NSI6 2320 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 TDRD15B5MCY1 1934 aaKnown RBP4.64□□□□□ -1.67
SF3B1-202ENST00000409915 ARHGAP10A1A4S6 786 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 KRT87PA6NCN2 255 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 TRIM49BA6NDI0 452 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM247A6NEH6 219 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 LRRIQ3A6PVS8 624 aaPredicted RBP4.64□□□□□ -1.67
SF3B1-202ENST00000409915 FAM25EA8MYX2 175 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 MUSKO15146 869 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 SART1O43290 800 aaKnown RBP4.64□□□□□ -1.67
SF3B1-202ENST00000409915 TXNL1O43396 289 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 EXTL3O43909 919 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 LRRN2O75325 713 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 TBX10O75333 385 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 B3GAT3O94766 335 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 USP1O94782 785 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 LRIG2O94898 1065 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 APBB3O95704 486 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 GLP2RO95838 553 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 EFEMP2O95967 443 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 NR3C1P04150 777 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 CLEC3BP05452 202 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 URODP06132 367 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 GSTA1P08263 222 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 RPSAP08865 295 aaKnown RBP4.64□□□□□ -1.67
SF3B1-202ENST00000409915 GSTA2P09210 222 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 DLATP10515 647 aaKnown RBP4.64□□□□□ -1.67
SF3B1-202ENST00000409915 C6P13671 934 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 NID1P14543 1247 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 CPA3P15088 417 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 EPCAMP16422 314 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 KCNA5P22460 613 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 IL4RP24394 825 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 AKT1P31749 480 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 ETV3P41162 512 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 BCL6P41182 706 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 PRCPP42785 496 aa4.64□□□□□ -1.67
SF3B1-202ENST00000409915 CD97P48960 835 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms