RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ANKS3Q6ZW76 656 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 DENND1CQ8IV53 801 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 CCNYL1Q8N7R7 359 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 OR13C4Q8NGS5 318 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 FATE1Q969F0 183 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 IFT43Q96FT9 208 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 DNAJC1Q96KC8 554 aaKnown RBP15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 MARK4Q96L34 752 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF512Q96ME7 567 aaPredicted RBP15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 TNFRSF12AQ9NP84 129 aa15.27■□□□□ 0.03
SCAMP4-202ENST00000409472 LOC285095A0A1B0GVY8 99 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 F5H5T6 163 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 H3BNC9 293 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 COCHO43405 550 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 OR52E8Q6IFG1 317 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 FRMD7Q6ZUT3 714 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 CILP2Q8IUL8 1156 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 FAM136AQ96C01 138 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 TBATAQ96M53 351 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 DEFB118Q96PH6 123 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 PPP1R2P1Q96PQ5 205 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 MATN2O00339 956 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 TM7SF2O76062 418 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 IRF1P10914 325 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 RAP1GDS1P52306 607 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF235Q14590 738 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 MUM1Q2TAK8 710 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 PPM1LQ5SGD2 360 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 TMCO4Q5TGY1 634 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 RIPOR1Q6ZS17 1223 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 SCUBE1Q8IWY4 988 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 CFAP61Q8NHU2 1237 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 RDH11Q8TC12 318 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 TSNARE1Q96NA8 513 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 RANBP9Q96S59 729 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 TTLL2Q9BWV7 592 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 CYP4F11Q9HBI6 524 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 CRYL1Q9Y2S2 319 aa15.26■□□□□ 0.03
SCAMP4-202ENST00000409472 A0A088AWK7 358 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 PITPNM1O00562 1244 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ACSL4O60488 711 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 MAGEC1O60732 1142 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TBX10O75333 385 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 PSMG1O95456 288 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 APOA4P06727 396 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 HNRNPLP14866 589 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 HMGA1P17096 107 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 PTPRRQ15256 657 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TBCCQ15814 346 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 HECTD2Q5U5R9 776 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 LRRC43Q8N309 656 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 LZICQ8WZA0 190 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 POLR1EQ9GZS1 481 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 NACA2Q9H009 215 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ILKAPQ9H0C8 392 aaPredicted RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 RNF38Q9H0F5 515 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 MRPL46Q9H2W6 279 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 POMKQ9H5K3 350 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TCF7L2Q9NQB0 619 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 MTRRQ9UBK8 725 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 RPL26L1Q9UNX3 145 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF232Q9UNY5 417 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 LRCH1Q9Y2L9 728 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 RAP2CQ9Y3L5 183 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 A0A0U1RQS6 177 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 C2orf78A6NCI8 922 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ZNF840PA6NDX5 716 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 H7C4K7 107 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TSPAN3O60637 253 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 PDE5AO76074 875 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 EFEMP2O95967 443 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ATP5BP06576 529 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 BMP1P13497 986 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 SERPINB5P36952 375 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 MAPKAPK2P49137 400 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 COPAP53621 1224 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TNK2Q07912 1038 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 ZRSR2Q15696 482 aaKnown RBP15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 TECRLQ5HYJ1 363 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC8B1Q6J4K2 584 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 CLSTN3Q9BQT9 956 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 SPON2Q9BUD6 331 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 SPO11Q9Y5K1 396 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 GMEB1Q9Y692 573 aa15.25■□□□□ 0.03
SCAMP4-202ENST00000409472 S1PR4O95977 384 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 LMNAP02545 664 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC4A1P02730 911 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 CCDC166P0CW27 439 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 COL6A2P12110 1019 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 TFEBP19484 476 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 CRABP2P29373 138 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 ATP5C1P36542 298 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 KCNC1P48547 511 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 RPL14P50914 215 aaKnown RBP15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 SLC12A2P55011 1212 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 POU4F1Q01851 419 aa15.24■□□□□ 0.03
SCAMP4-202ENST00000409472 GNA12Q03113 381 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms