RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 METTL6Q8TCB7 284 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TNKS2Q9H2K2 1166 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 DCLRE1BQ9H816 532 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ATP6AP2A0A1C7CYW4 349 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TBC1D3BA6NDS4 549 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ATP6AP2O75787 350 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ZMPSTE24O75844 475 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 GJB5O95377 273 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 MSANTD2Q6P1R3 559 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TRPC4APQ8TEL6 797 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 STYXQ8WUJ0 223 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 INPP5DQ92835 1189 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 MARK4Q96L34 752 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 GID8Q9NWU2 228 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 OR51F1A6NGY5 319 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 RAD51BO15315 384 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 SOD2P04179 222 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 PPP3CCP48454 512 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TBL3Q12788 808 aaKnown RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 CNSTQ6PJW8 725 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 BNC2Q6ZN30 1099 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 HHIPL1Q96JK4 782 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 HGH1Q9BTY7 390 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 SLC2A6Q9UGQ3 507 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ARIH1Q9Y4X5 557 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 NR5A2O00482 541 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TOP3BO95985 862 aaKnown RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 NR6A1Q15406 480 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 SPRED3Q2MJR0 410 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ATXN7L2Q5T6C5 722 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 KIAA0930Q6ICG6 404 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 SCD5Q86SK9 330 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 TTC30BQ8N4P2 665 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF557Q8N988 423 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 RDH11Q8TC12 318 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 BRSK1Q8TDC3 778 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 C7orf26Q96N11 449 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 GATA5Q9BWX5 397 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 CCDC134Q9H6E4 229 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 WDR55Q9H6Y2 383 aaPredicted RBP14.09□□□□□ -0.15
SCAF4-202ENST00000399804 CERS4Q9HA82 394 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 HCSTQ9UBK5 93 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 APPL1Q9UKG1 709 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 ZNF510Q9Y2H8 683 aa14.09□□□□□ -0.15
SCAF4-202ENST00000399804 SNAP91O60641 907 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 NOL3O60936 208 aaKnown RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 PDE5AO76074 875 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 MSH3P20585 1137 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 SLC1A2P43004 574 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 LTBP1Q14766 1721 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 RARS2Q5T160 578 aaKnown RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.169e-8■■■■□ 23.9
SCAF4-202ENST00000399804 MYO19Q96H55 970 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 COL6A2P12110 1019 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 MPSTP25325 297 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 SLC25A3Q00325 362 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ACOX1Q15067 660 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 TEDDM1Q5T9Z0 273 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ERAP2Q6P179 960 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 FSTL5Q8N475 847 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ZFYVE1Q9HBF4 777 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ARL8BQ9NVJ2 186 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 THG1LQ9NWX6 298 aaKnown RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 PRR5-ARHGAP8B1AHC4 643 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 STK25O00506 426 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 SLC7A4O43246 635 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 GOT2P00505 430 aaKnown RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 PRKCGP05129 697 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 UGT2B4P06133 528 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 CCNG1P51959 295 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ARHGAP8P85298 464 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ZNF33AQ06730 810 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 FNDC3BQ53EP0 1204 aaKnown RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ARL13AQ5H913 290 aaPredicted RBP14.08□□□□□ -0.16
SCAF4-202ENST00000399804 PGBD3Q8N328 593 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ICA1LQ8NDH6 482 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 GSTCDQ8NEC7 633 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 OR13C4Q8NGS5 318 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 DNAJC9Q8WXX5 260 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 IGSF8Q969P0 613 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 TSGA13Q96PP4 275 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 ARL5AQ9Y689 179 aa14.08□□□□□ -0.16
SCAF4-202ENST00000399804 TMEM114B3SHH9 223 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 OR56A5P0C7T3 313 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 IL10P22301 178 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 PFKPQ01813 784 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 FASTKQ14296 549 aaKnown RBP14.07□□□□□ -0.16
SCAF4-202ENST00000399804 VWA5B1Q5TIE3 1220 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 PIK3R6Q5UE93 754 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 SDE2Q6IQ49 451 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 SLC39A5Q6ZMH5 540 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 ADCK2Q7Z695 626 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 C7orf61Q8IZ16 206 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 OR56A4Q8NGH8 313 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 OLIG1Q8TAK6 271 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 ING5Q8WYH8 240 aa14.07□□□□□ -0.16
SCAF4-202ENST00000399804 PANX3Q96QZ0 392 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms