RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SRP54P61011 504 aaKnown RBP14.31□□□□□ -0.12
NELFE-201ENST00000375425 AP1S1P61966 158 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 ZBED6P86452 979 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 TCEA2Q15560 299 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 ISXQ2M1V0 245 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 ALG11Q2TAA5 492 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 PERM1Q5SV97 790 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 TMCO4Q5TGY1 634 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 TXNRD3NBQ6F5E7 133 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 ESRP1Q6NXG1 681 aaKnown RBP14.31□□□□□ -0.12
NELFE-201ENST00000375425 TMCO3Q6UWJ1 677 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 LIPIQ6XZB0 460 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 NYAP1Q6ZVC0 841 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 FSTL5Q8N475 847 aaPredicted RBP14.31□□□□□ -0.12
NELFE-201ENST00000375425 TPCN2Q8NHX9 752 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 SCG3Q8WXD2 468 aaKnown RBP14.31□□□□□ -0.12
NELFE-201ENST00000375425 ZNF599Q96NL3 588 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 CSPG4P5Q96PW8 444 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.31□□□□□ -0.12
NELFE-201ENST00000375425 PADI4Q9UM07 663 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 CAPN11Q9UMQ6 739 aa14.31□□□□□ -0.12
NELFE-201ENST00000375425 CASC3O15234 703 aaKnown RBP14.3□□□□□ -0.12
NELFE-201ENST00000375425 MAFKO60675 156 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 RASGRP1O95267 797 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 PEX11BO96011 259 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 ALPIP09923 528 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 ELFN1P0C7U0 828 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 LSSP48449 732 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 GABREP78334 506 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 CCDC173Q0VFZ6 552 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 RALGDSQ12967 914 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 MTM1Q13496 603 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 COL9A2Q14055 689 aaPredicted RBP14.3□□□□□ -0.12
NELFE-201ENST00000375425 ELOCQ15369 112 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 NFKBIBQ15653 356 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 LVRNQ6Q4G3 990 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 LSMEM2Q8N112 164 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 NIPA2Q8N8Q9 360 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 POLR1BQ9H9Y6 1135 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 GULP1Q9UBP9 304 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 KLQ9UEF7 1012 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 IP6K2Q9UHH9 426 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 ANAPC7Q9UJX3 599 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 PCDHGC4Q9Y5F7 938 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 RAI2Q9Y5P3 530 aa14.3□□□□□ -0.12
NELFE-201ENST00000375425 A0A087X0T9 212 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 MYO1FO00160 1098 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 HTRA2O43464 458 aaPredicted RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 TNFP01375 233 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 FAM228BP0C875 321 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 ZNF235Q14590 738 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 KCTD16Q68DU8 428 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 DPPA4Q7L190 304 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 SDR16C5Q8N3Y7 309 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 PGBD5Q8N414 524 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 ATL2Q8NHH9 583 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 PDCD6IPQ8WUM4 868 aaKnown RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 TEKT4Q8WW24 435 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 NAT6Q93015 286 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 FUBP1Q96AE4 644 aaKnown RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 WDR92Q96MX6 357 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 ZNF578Q96N58 590 aaPredicted RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 BBC3Q96PG8 261 aaPredicted RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 CCDC3Q9BQI4 270 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 NUP85Q9BW27 656 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 PCDH18Q9HCL0 1135 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 SIRPGQ9P1W8 387 aa14.29□□□□□ -0.12
NELFE-201ENST00000375425 LUC7L2Q9Y383 392 aaKnown RBP14.29□□□□□ -0.12
NELFE-201ENST00000375425 TMEM202A6NGA9 273 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 GOLGA6L19H0YKK7 550 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 CACNB4O00305 520 aaPredicted RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 TCEA3O75764 348 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 DXOO77932 396 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 CYP1A2P05177 515 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 GM2AP17900 193 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 CR2P20023 1033 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 IL4RP24394 825 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 TRIM23P36406 574 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 HSPA9P38646 679 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 SLC25A11Q02978 314 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 CCDC122Q5T0U0 273 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 ALKBH5Q6P6C2 394 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 RBM44Q6ZP01 1051 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 GKN2Q86XP6 184 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 BBS5Q8N3I7 341 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 ARL10Q8N8L6 244 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 OR56A4Q8NGH8 313 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 PCDH19Q8TAB3 1148 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 SPOCK2Q92563 424 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 GRAMD1AQ96CP6 724 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 IQCDQ96DY2 449 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 PDXPQ96GD0 296 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 ATXN7L3BQ96GX2 97 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 NAF1Q96HR8 494 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 NUDCD1Q96RS6 583 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 PRORYQ9H606 182 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 NOD2Q9HC29 1040 aa14.28□□□□□ -0.12
NELFE-201ENST00000375425 MRPL40Q9NQ50 206 aaKnown RBP14.28□□□□□ -0.12
NELFE-201ENST00000375425 B4GALT6Q9UBX8 382 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms