RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 CASC4Q6P4E1 433 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 DPY19L3Q6ZPD9 716 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 Q6ZVU0 165 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 TEX9Q8N6V9 391 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 OR2A12Q8NGT7 310 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CEP44Q9C0F1 390 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 KCNK12Q9HB15 430 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 LIMD1Q9UGP4 676 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CORO1CQ9ULV4 474 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 SOX13Q9UN79 622 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 COL4A2P08572 1712 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 FAM237BA0A1B0GVD1 139 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CXorf49A8MYA2 514 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 AP3B1O00203 1094 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 HTRA2O43464 458 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 ALDH1A2O94788 518 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PIGNO95427 931 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 NDST3O95803 873 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PAX7P23759 505 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 NMBRP28336 390 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 SMAD2Q15796 467 aaKnown RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 ACCSLQ4AC99 568 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PCID2Q5JVF3 399 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 SLC44A3Q8N4M1 653 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PCDH20Q8N6Y1 951 aaKnown RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CHST14Q8NCH0 376 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 HLA-CQ95604 372 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 PHF7Q9BWX1 381 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 BRD9Q9H8M2 597 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 ARHGEF3Q9NR81 526 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 IL1RAPL1Q9NZN1 696 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 CTNNAL1Q9UBT7 734 aa14.78□□□□□ -0.04
CXCL12-201ENST00000343575 ARIH1Q9Y4X5 557 aaPredicted RBP14.78□□□□□ -0.04
CXCL12-201ENST00000343575 TLDC2A0PJX2 215 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 GSRP00390 522 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 RPSAP08865 295 aaKnown RBP14.77□□□□□ -0.05
CXCL12-201ENST00000343575 HLA-DPA1P20036 260 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 PRKCHP24723 683 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 EIF2DP41214 584 aaKnown RBP14.77□□□□□ -0.05
CXCL12-201ENST00000343575 SLCO1A2P46721 670 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 STAT4Q14765 748 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 MYLK3Q32MK0 819 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 KBTBD12Q3ZCT8 623 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 ANKRD20A4Q4UJ75 823 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 CARD16Q5EG05 197 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 HABP4Q5JVS0 413 aaKnown RBP14.77□□□□□ -0.05
CXCL12-201ENST00000343575 IER5LQ5T953 404 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 PKN3Q6P5Z2 889 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 CYS1Q717R9 158 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 ZSWIM9Q86XI8 627 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 CCNJLQ8IV13 435 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 ZNF366Q8N895 744 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 CFAP61Q8NHU2 1237 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 GSDMBQ8TAX9 411 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 EZH1Q92800 747 aaPredicted RBP14.77□□□□□ -0.05
CXCL12-201ENST00000343575 PTPRN2Q92932 1015 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 KLHL29Q96CT2 875 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 IFT43Q96FT9 208 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 NAT9Q9BTE0 207 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 PRKAG3Q9UGI9 489 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 SLC2A6Q9UGQ3 507 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 SPO11Q9Y5K1 396 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 RPS6KL1Q9Y6S9 549 aa14.77□□□□□ -0.05
CXCL12-201ENST00000343575 CCDC78A2IDD5 438 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 LDB2O43679 373 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 UBOX5O94941 541 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 KAT7O95251 611 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 IGSF6O95976 241 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ASLP04424 464 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 FGF1P05230 155 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ATP5BP06576 529 aaKnown RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 SRPRAP08240 638 aaKnown RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 GSTA2P09210 222 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 PIRTP0C851 137 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ARNTP27540 789 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 CCNHP51946 323 aaPredicted RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 SNRPD1P62314 119 aaKnown RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 C11orf91Q3C1V1 193 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 CMPK2Q5EBM0 449 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 TXNDC11Q6PKC3 985 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 AGAP11Q8TF27 550 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 DYDC1Q8WWB3 177 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 PIH1D2Q8WWB5 315 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 DHRS4Q9BTZ2 278 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 TREX1Q9NSU2 369 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 TCAF1Q9Y4C2 921 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 KCTD3Q9Y597 815 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 PCDHB9Q9Y5E1 797 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 TCF20Q9UGU0 1960 aaKnown RBP14.76□□□□□ -0.05
CXCL12-201ENST00000343575 MAGEB16A2A368 324 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 MROH6A6NGR9 719 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 SMIM23A6NLE4 172 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ANKRD66B4E2M5 251 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 AURKAO14965 403 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 BNIP3LO60238 219 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 SPAG6O75602 509 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 USP1O94782 785 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 PGLSO95336 258 aa14.76□□□□□ -0.05
CXCL12-201ENST00000343575 ASGR2P07307 311 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 421 ms