RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 ACAD10Q6JQN1 1059 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ARHGAP36Q6ZRI8 547 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 NUP54Q7Z3B4 507 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SPATA20Q8TB22 786 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ETNPPLQ8TBG4 499 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PTCD3Q96EY7 689 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 OSBPL3Q9H4L5 887 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ELAC1Q9H777 363 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 ANKZF1Q9H8Y5 726 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 EXD2Q9NVH0 621 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 NR2F6P10588 404 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 AHCYP23526 432 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PRDX5P30044 214 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 MANFP55145 182 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 GRM4Q14833 912 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SF1Q15637 639 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLC18A3Q16572 532 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 C10orf107Q8IVU9 208 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PIK3C3Q8NEB9 887 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 MGME1Q9BQP7 344 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 MKNK1Q9BUB5 465 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PGRP06401 933 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 RPL3P39023 403 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLC12A3P55017 1021 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SNRPD1P62314 119 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 CBLBQ13191 982 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PUM1Q14671 1186 aaKnown RBP eCLIP10.32□□□□□ -0.76
SLF2-201ENST00000238961 NRF1Q16656 503 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 LSM12Q3MHD2 195 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PTPN20Q4JDL3 420 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ZC2HC1CQ53FD0 456 aaPredicted RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 OVOS1Q6IE37 1185 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 VANGL1Q8TAA9 524 aaPredicted RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 SSH3Q8TE77 659 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ASB12Q8WXK4 309 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 BSNDQ8WZ55 320 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PLEKHG4BQ96PX9 1271 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 CORO1BQ9BR76 489 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 REEP2Q9BRK0 252 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 CHIAQ9BZP6 476 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 TMEM27Q9HBJ8 222 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ZFP14Q9HCL3 533 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 GPR108Q9NPR9 543 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 IMP3Q9NV31 184 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 C15orf38-AP3S2A0A0A6YYH1 394 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 A0A0A6YYK5 440 aaPredicted RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 ZNF878C9JN71 531 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 HSPA12AO43301 675 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 AP3S2P59780 193 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 TEAD4Q15561 434 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLC9B1Q4ZJI4 515 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 UBXN11Q5T124 520 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 C3orf33Q6P1S2 294 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ARSKQ6UWY0 536 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 UBE2J2Q8N2K1 259 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 NAT9Q9BTE0 207 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 FBXO28Q9NVF7 368 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 RNF17Q9BXT8 1623 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 GNB5O14775 395 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 FFAR3O14843 346 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 GPR42O15529 346 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SSX5O60225 188 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ZNF20P17024 532 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PVALBP20472 110 aaPredicted RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 TAS2R50P59544 299 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 DEFA5Q01523 94 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLC10A7Q0GE19 358 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ILF3Q12906 894 aaKnown RBP eCLIP10.32□□□□□ -0.761e-6■■■■■ 26.8
SLF2-201ENST00000238961 C9orf64Q5T6V5 341 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PRAMEF17Q5VTA0 474 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLC34A3Q8N130 599 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ZNF565Q8N9K5 539 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 LSM14AQ8ND56 463 aaKnown RBP10.32□□□□□ -0.76
SLF2-201ENST00000238961 SLAIN1Q8ND83 568 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ACOT12Q8WYK0 555 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 LMLNQ96KR4 655 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 CCDC28BQ9BUN5 200 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 AP3M1Q9Y2T2 418 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 ALG5Q9Y673 324 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 PMF1-BGLAPU3KQ54 211 aa10.32□□□□□ -0.76
SLF2-201ENST00000238961 A0A0G2JLW4 131 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 UGT2B17O75795 530 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 KAT7O95251 611 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 ZNF549Q6P9A3 640 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 RBM23Q86U06 439 aaKnown RBP10.31□□□□□ -0.76
SLF2-201ENST00000238961 SPAG16Q8N0X2 631 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 OXER1Q8TDS5 423 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 KXD1Q9BQD3 176 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 B3GNT4Q9C0J1 378 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 FAM105AQ9NUU6 356 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 SNX12Q9UMY4 172 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 POLR1AO95602 1720 aaPredicted RBP10.31□□□□□ -0.76
SLF2-201ENST00000238961 PLEKHG2Q9H7P9 1386 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 TRBV23OR9-2A0A075B6M9 112 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 A0A087X0B3 334 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
SLF2-201ENST00000238961 KRT36O76013 467 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms