RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 SYCE2Q6PIF2 218 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 KYAT3Q6YP21 454 aaKnown RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 KIAA0907Q7Z7F0 614 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 CMC1Q7Z7K0 106 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 BPIFB1Q8TDL5 484 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 MYO19Q96H55 970 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 HACD3Q9P035 362 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 EVLQ9UI08 416 aaPredicted RBP18.22■□□□□ 0.51
VIM-201ENST00000224237 PCDHB9Q9Y5E1 797 aa18.22■□□□□ 0.51
VIM-201ENST00000224237 PGLSO95336 258 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 ADH1CP00326 375 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 CYP17A1P05093 508 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 ABCG1P45844 678 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 LEPRP48357 1165 aaKnown RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 ZNF140P52738 457 aaPredicted RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 RPL26P61254 145 aaKnown RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 ECT2LQ008S8 904 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 EML3Q32P44 896 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 DGKKQ5KSL6 1271 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 GKAP1Q5VSY0 366 aaPredicted RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 PTAR1Q7Z6K3 402 aaPredicted RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 CILP2Q8IUL8 1156 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 OTUD6BQ8N6M0 293 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 EFHBQ8N7U6 833 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 MDGA1Q8NFP4 955 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 OR13C4Q8NGS5 318 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 TBATAQ96M53 351 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 TNKS2Q9H2K2 1166 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 ATP13A3Q9H7F0 1226 aa18.21■□□□□ 0.51
VIM-201ENST00000224237 NLE1Q9NVX2 485 aaPredicted RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 RPL26L1Q9UNX3 145 aaKnown RBP18.21■□□□□ 0.51
VIM-201ENST00000224237 ADH5P11766 374 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 SERPINB4P48594 390 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 ILF2Q12905 390 aaKnown RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 TRIM68Q6AZZ1 485 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 FOXR1Q6PIV2 292 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 CHRDL2Q6WN34 429 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 MICALCLQ6ZW33 695 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 ADIPOR2Q86V24 386 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 CAMK1DQ8IU85 385 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 PCDH20Q8N6Y1 951 aaKnown RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 OR6K2Q8NGY2 324 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 FGFR1OP2Q9NVK5 253 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 OBP2AQ9NY56 170 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 FBXO10Q9UK96 956 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 SLC39A10Q9ULF5 831 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 BPTFQ12830 3046 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 EBAG9O00559 213 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 CCL22O00626 93 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 TRAFD1O14545 582 aaPredicted RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 HOXC11O43248 304 aaPredicted RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 HTRA2O43464 458 aaPredicted RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 BUD23O43709 281 aaKnown RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 GSRP00390 522 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 GSTA1P08263 222 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 LPOP22079 712 aaPredicted RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 PSMA3P25788 255 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 SERPINA4P29622 427 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 SLC8A1P32418 973 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 TMPRSS15P98073 1019 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 USP10Q14694 798 aaKnown RBP18.2■□□□□ 0.5
VIM-201ENST00000224237 MBLAC2Q68D91 279 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 ANKRD54Q6NXT1 300 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 NAT16Q8N8M0 369 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 ARMC2Q8NEN0 867 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 ASIC4Q96FT7 647 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 CDKN2AIPNLQ96HQ2 116 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 CAB39LQ9H9S4 337 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 TRPV4Q9HBA0 871 aa18.2■□□□□ 0.5
VIM-201ENST00000224237 A0A096LPK6 155 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 FAM95CA0A1B0GW59 222 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 WDR91A4D1P6 747 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 AURKAO14965 403 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 TRIM24O15164 1050 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 PIGNO95427 931 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 NFATC1O95644 943 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 TOP3BO95985 862 aaKnown RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 GOT2P00505 430 aaKnown RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 POLR2EP19388 210 aaKnown RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 CSRP3P50461 194 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 ZKSCAN8Q15776 578 aaPredicted RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 PPM1JQ5JR12 505 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 MRNIPQ6NTE8 343 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 RYBPQ8N488 228 aaPredicted RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 OR4K2Q8NGD2 314 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 GPR150Q8NGU9 434 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 ZNF75CPQ92670 426 aaPredicted RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 TUBGCP5Q96RT8 1024 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 MAGEE1Q9HCI5 957 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 FBXO6Q9NRD1 293 aaPredicted RBP18.19■□□□□ 0.5
VIM-201ENST00000224237 UNC80Q8N2C7 3258 aa18.19■□□□□ 0.5
VIM-201ENST00000224237 EYSQ5T1H1 3165 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 CCDC162PA2VCL2 907 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 HAUS5O94927 633 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 C2P06681 752 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 OGNP20774 298 aaKnown RBP18.18■□□□□ 0.5
VIM-201ENST00000224237 ABL2P42684 1182 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 CLCN5P51795 746 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 PTPRCAPQ14761 206 aa18.18■□□□□ 0.5
VIM-201ENST00000224237 ACCSLQ4AC99 568 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms