RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 RCVRNP35243 200 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 TNK2Q07912 1038 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ZNF155Q12901 538 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 DGCR6Q14129 220 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 LSM12Q3MHD2 195 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 XKR4Q5GH76 650 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PLPPR4Q7Z2D5 763 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 C12orf29Q8N999 325 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.13□□□□□ -0.635e-7■■■■■ 39.7
KNOP1-201ENST00000219837 PCDHAC2Q9Y5I4 1007 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 H7C0S8 307 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 OR10H3O60404 316 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 SNRPB2P08579 225 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 MRPS22P82650 360 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ZIK1Q3SY52 487 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 MZT2BQ6NZ67 158 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PIGKQ92643 395 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 CERS2Q96G23 380 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 LMLNQ96KR4 655 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 CRISPLD1Q9H336 500 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 C15orf38-AP3S2A0A0A6YYH1 394 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 MATN4O95460 622 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ELNP15502 786 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 UGT1A5P35504 534 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PPM1AP35813 382 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 IDH2P48735 452 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 SULT2A1Q06520 285 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ARPINQ7Z6K5 226 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PPCDCQ96CD2 204 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 FRMD6Q96NE9 622 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 WDR18Q9BV38 432 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 TMEM138Q9NPI0 162 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 COMMD9Q9P000 198 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 SSNA1O43805 119 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 TOP3BO95985 862 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 OTCP00480 354 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ERBB2P04626 1255 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 H2AFXP16104 143 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 GRIA3P42263 894 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 SF1Q15637 639 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 LEMD2Q8NC56 503 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PHF10Q8WUB8 498 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 LMAN2LQ9H0V9 348 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 TNKS2Q9H2K2 1166 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 MMADHCQ9H3L0 296 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 DDX18Q9NVP1 670 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ALKBH4Q9NXW9 302 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PHF11Q9UIL8 331 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 COL5A2P05997 1499 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PXDNQ92626 1479 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 STX11O75558 287 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 CST1P01037 141 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 TFEBP19484 476 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ITGA3P26006 1051 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 CAPSQ13938 189 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 VANGL1Q8TAA9 524 aaPredicted RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 CD101Q93033 1021 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 MYDGFQ969H8 173 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ZNF607Q96SK3 696 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 IDI2Q9BXS1 227 aa11.13□□□□□ -0.63
KNOP1-201ENST00000219837 PAIP1Q9H074 479 aaKnown RBP11.13□□□□□ -0.63
KNOP1-201ENST00000219837 ZSCAN5CA6NGD5 496 aaPredicted RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 MAGEB3O15480 346 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 PAPSS1O43252 624 aaPredicted RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 B4GALT5O43286 388 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 TCEA3O75764 348 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 CBX6O95503 412 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 LPOP22079 712 aaPredicted RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 SMAD3P84022 425 aaKnown RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 TAB1Q15750 504 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 PARP8Q8N3A8 854 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ANKRD52Q8NB46 1076 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 MCMBPQ9BTE3 642 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 LACRTQ9GZZ8 138 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ARHGAP23Q9P227 1491 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 PTPN5P54829 565 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 MANFP55145 182 aaKnown RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 MRPS5P82675 430 aaKnown RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ZNF844Q08AG5 666 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ATP13A4Q4VNC1 1196 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 SPANXN2Q5MJ10 180 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 OAFQ86UD1 273 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 CDYL2Q8N8U2 506 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ING5Q8WYH8 240 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 TRNT1Q96Q11 434 aaKnown RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 LEF1Q9UJU2 399 aaPredicted RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 TMEM88BA6NKF7 163 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 RECQL5O94762 991 aaPredicted RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 GLUD2P49448 558 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 FBXO42Q6P3S6 717 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 C1orf186Q6ZWK4 172 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 ZCCHC7Q8N3Z6 543 aaKnown RBP11.12□□□□□ -0.63
KNOP1-201ENST00000219837 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 SETD6Q8TBK2 473 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 KCNS3Q9BQ31 491 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 KCNK4Q9NYG8 393 aa11.12□□□□□ -0.63
KNOP1-201ENST00000219837 RNASEH2AO75792 299 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms