RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 HPS4Q9NQG7 708 aa13.2□□□□□ -0.3
DNMT1-207ENST00000586588 TCEAL9Q9UHQ7 104 aa13.2□□□□□ -0.3
DNMT1-207ENST00000586588 AP4E1Q9UPM8 1137 aa13.2□□□□□ -0.3
DNMT1-207ENST00000586588 TARM1B6A8C7 271 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 G3V3G9 751 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 CCNE2O96020 404 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PDGFRAP16234 1089 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 NKX2-5P52952 324 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 CLCQ05315 142 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PRR23CQ6ZRP0 262 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 SPERTQ8NA61 448 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PAPD5Q8NDF8 572 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 IL31RAQ8NI17 732 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PHF10Q8WUB8 498 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 LRRN4Q8WUT4 740 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RXFP2Q8WXD0 754 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 HDAC2Q92769 488 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ING2Q9H160 280 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 CAB39LQ9H9S4 337 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MRM3Q9HC36 420 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 UGT2A1Q9Y4X1 527 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 LOC105371267A0A1B0GV96 52 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 A6NL46 340 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 BBIP1A8MTZ0 92 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ITIH1P19827 911 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 CD40LGP29965 261 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 TGFB2P61812 414 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PSMD5Q16401 504 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 PAGE2BQ5JRK9 111 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RNF19BQ6ZMZ0 732 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 BEST2Q8NFU1 509 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 SUN5Q8TC36 379 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RASSF5Q8WWW0 418 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 NECTIN3Q9NQS3 549 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ACSS2Q9NR19 701 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 BAG5Q9UL15 447 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MAGEB16A2A368 324 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MDM4O15151 490 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 TPST1O60507 370 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 GABARAPO95166 117 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 HDCP19113 662 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 GRK3P35626 688 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ASPAP45381 313 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ATP4BP51164 291 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RPS6P62753 249 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 IGBP1P78318 339 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 POLD3Q15054 466 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RAB6CQ53S08 254 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 THAP5Q7Z6K1 395 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 TBC1D21Q8IYX1 336 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ATXN7L3BQ96GX2 97 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 ZBTB45Q96K62 511 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 FCRL3Q96P31 734 aaPredicted RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 SNX18Q96RF0 628 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 IL12RB2Q99665 862 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MCMBPQ9BTE3 642 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RAB6CQ9H0N0 254 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MUC13Q9H3R2 512 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 LRRC40Q9H9A6 602 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 MEAF6Q9HAF1 191 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 RAVER2Q9HCJ3 691 aaKnown RBP13.19□□□□□ -0.3
DNMT1-207ENST00000586588 TLK1Q9UKI8 766 aa13.19□□□□□ -0.3
DNMT1-207ENST00000586588 NME4O00746 187 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 IDH3BO43837 385 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 CDH1P12830 882 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 GFAPP14136 432 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 PRKCAP17252 672 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 NAMPTP43490 491 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 GJA9P57773 515 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 LAMC2Q13753 1193 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 CCDC14Q49A88 953 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 TRNP1Q6NT89 227 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 LAYNQ6UX15 382 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 RFPL4BQ6ZWI9 263 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 R3HCC1LQ7Z5L2 792 aaKnown RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 PIGZQ86VD9 579 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 RHOXF1Q8NHV9 184 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 ANGPTL6Q8NI99 470 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 HTR3CQ8WXA8 447 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 MFSD3Q96ES6 412 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 EMILIN2Q9BXX0 1053 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 POLR3FQ9H1D9 316 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 SOX17Q9H6I2 414 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 EIF3LQ9Y262 564 aaKnown RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 PTPRFP10586 1907 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 TMEM233B4DJY2 109 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 H0Y858 1186 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 GH2P01242 217 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 ABCB1P08183 1280 aaPredicted RBP13.18□□□□□ -0.3
DNMT1-207ENST00000586588 UMPSP11172 480 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 CYP2F1P24903 491 aa13.18□□□□□ -0.3
DNMT1-207ENST00000586588 OXTRP30559 389 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms