RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 BRAT1Q6PJG6 821 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 PRPF39Q86UA1 669 aaKnown RBP12.71□□□□□ -0.37
RETREG3-203ENST00000585894 HORMAD1Q86X24 394 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 CDKL3Q8IVW4 592 aaPredicted RBP12.71□□□□□ -0.37
RETREG3-203ENST00000585894 KIAA2013Q8IYS2 634 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 MS4A14Q96JA4 679 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 TEKT5Q96M29 485 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 WDR24Q96S15 920 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 TDRD1Q9BXT4 1180 aaKnown RBP12.71□□□□□ -0.37
RETREG3-203ENST00000585894 PCED1AQ9H1Q7 454 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 AMACRQ9UHK6 382 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 COQ6Q9Y2Z9 468 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 JRKLQ9Y4A0 524 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 PCDHGA5Q9Y5G8 931 aa12.71□□□□□ -0.37
RETREG3-203ENST00000585894 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.71□□□□□ -0.37
RETREG3-203ENST00000585894 A0A1W2PPC4 97 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 RIOK3O14730 519 aaKnown RBP12.71□□□□□ -0.38
RETREG3-203ENST00000585894 AP1G1O43747 822 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 SOCS5O75159 536 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 PGLSO95336 258 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 FGGP02679 453 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 ALPIP09923 528 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 CD27P26842 260 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 CCR5P51681 352 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 GDF10P55107 478 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 GNG11P61952 73 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 CCDC15Q0P6D6 951 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 SNX1Q13596 522 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 TRIM61Q5EBN2 209 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 PID1Q7Z2X4 250 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 TRIM69Q86WT6 500 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 SLC35B2Q8TB61 432 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 CCDC110Q8TBZ0 833 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 COG1Q8WTW3 980 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 RAB7BQ96AH8 199 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 IMP4Q96G21 291 aaKnown RBP12.71□□□□□ -0.38
RETREG3-203ENST00000585894 TMEM121Q9BTD3 319 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 USP29Q9HBJ7 922 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.38
RETREG3-203ENST00000585894 FANCGO15287 622 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 RAD51BO15315 384 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 BCAT2O15382 392 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-203ENST00000585894 FZD6O60353 706 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 PMPCBO75439 489 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 PRLP01236 227 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 SERPINF2P08697 491 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 MMP12P39900 470 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 CSNK1EP49674 416 aaKnown RBP12.7□□□□□ -0.38
RETREG3-203ENST00000585894 IRX4P78413 519 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 RALGDSQ12967 914 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 RALGPS1Q5JS13 557 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 ARMC12Q5T9G4 340 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 PEAR1Q5VY43 1037 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-203ENST00000585894 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 TAB3Q8N5C8 712 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-203ENST00000585894 FAM71DQ8N9W8 422 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 TTC13Q8NBP0 860 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 LPCAT1Q8NF37 534 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 OR2I1PQ8NGU4 316 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 PIH1D2Q8WWB5 315 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 SERAC1Q96JX3 654 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 GORASP1Q9BQQ3 440 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 SLC25A51Q9H1U9 297 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 VPS45Q9NRW7 570 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 B4GALT6Q9UBX8 382 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
RETREG3-203ENST00000585894 A0A1B0GVT2 93 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 NPIPB15A6NHN6 443 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-203ENST00000585894 H0Y8X5 98 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 ZNF185O15231 689 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 MTSS1O43312 755 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 TSPAN6O43657 245 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 LIASO43766 372 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 GDF9O60383 454 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 PAK4O96013 591 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-203ENST00000585894 WNT1P04628 370 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 ZNF806P0C7X5 589 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 CLDN2P57739 230 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 GALNT3Q14435 633 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 CSRP2Q16527 193 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 LONRF2Q1L5Z9 754 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 DENND2CQ68D51 928 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 ERAP2Q6P179 960 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 PRR23CQ6ZRP0 262 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 TSPAN33Q86UF1 283 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 HCAR2Q8TDS4 363 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 CXorf40AQ8TE69 158 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 OXNAD1Q96HP4 312 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-203ENST00000585894 FEM1CQ96JP0 617 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 PCDH9Q9HC56 1237 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 AASDHPPTQ9NRN7 309 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 RSPH14Q9UHP6 348 aa12.69□□□□□ -0.38
RETREG3-203ENST00000585894 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 LNP1A1A4G5 178 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 C6P13671 934 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 LHCGRP22888 699 aa12.68□□□□□ -0.38
RETREG3-203ENST00000585894 PSMB4P28070 264 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms