RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 PTPRBP23467 1997 aa21.61■■□□□ 1.05
PPP4R1-228ENST00000584074 TRAFD1O14545 582 aaPredicted RBP21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 SCAMP1O15126 338 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 TPM1P09493 284 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 CDK4P11802 303 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 MYF5P13349 255 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 JUNDP17535 347 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 YPEL5P62699 121 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 LRRC14Q15048 493 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 WSCD2Q2TBF2 565 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 HS1BP3Q53T59 392 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 TMPRSS12Q86WS5 348 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 NLGN3Q9NZ94 848 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 PNMA8BQ9ULN7 279 aaPredicted RBP21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 PLXNB3Q9ULL4 1909 aa21.6■■□□□ 1.05
PPP4R1-228ENST00000584074 NEMP2A6NFY4 417 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 SRRM3A6NNA2 597 aaPredicted RBP21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 TMEM110-MUSTN1A8MSY1 372 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 H3BM21 787 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 K7ESM1 405 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 TAF4O00268 1085 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 LZTS3O60299 673 aaPredicted RBP21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 TMEM253P0C7T8 217 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 ALPPL2P10696 532 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 ACP1P24666 158 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 RALGDSQ12967 914 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 ILKQ13418 452 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 CAMK2BQ13554 666 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 PTK2BQ14289 1009 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 RBFAQ8N0V3 343 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 KCTD6Q8NC69 237 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 PCDH19Q8TAB3 1148 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 MDM1Q8TC05 714 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 TCEAL2Q9H3H9 227 aaPredicted RBP21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 NHEJ1Q9H9Q4 299 aaPredicted RBP21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 NOD2Q9HC29 1040 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 SPTLC3Q9NUV7 552 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 PCDHGC4Q9Y5F7 938 aa21.59■■□□□ 1.05
PPP4R1-228ENST00000584074 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 TRABD2BA6NFA1 517 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 A8MX80 341 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 MFSD11O43934 449 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 JUPP14923 745 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 CR2P20023 1033 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 HSPA9P38646 679 aaKnown RBP21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 MAXP61244 160 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 POLR2LP62875 67 aaKnown RBP21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 DAB2P98082 770 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 ANKRD20A8PQ5CZ79 823 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 MARC1Q5VT66 337 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 LMX1AQ8TE12 382 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 APOLD1Q96LR9 279 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 CCDC42Q96M95 316 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 NUDCD1Q96RS6 583 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 MGME1Q9BQP7 344 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 CCDC86Q9H6F5 360 aaKnown RBP21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 SCUBE2Q9NQ36 999 aa21.58■■□□□ 1.05
PPP4R1-228ENST00000584074 AQP9O43315 295 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 MAP3K6O95382 1288 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 CKMT1AP12532 417 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 MMP13P45452 471 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 INPP5AQ14642 412 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 MESDQ14696 234 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 PAFAH1B3Q15102 231 aaKnown RBP21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 AGERQ15109 404 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 HES3Q5TGS1 186 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 NCBP2-AS2Q69YL0 99 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 LIPIQ6XZB0 460 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 MACC1Q6ZN28 852 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 PROSER1Q86XN7 944 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 SLC35G2Q8TBE7 412 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 NSMCE1Q8WV22 266 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 ZNF670Q9BS34 389 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 OR1A2Q9Y585 309 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 CSNK1G3Q9Y6M4 447 aa21.57■■□□□ 1.04
PPP4R1-228ENST00000584074 LY6G6EA0A0G2JKS1 128 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 CFAP69A5D8W1 941 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 TOR1BO14657 336 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 HTRA2O43464 458 aaPredicted RBP21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 GCATO75600 419 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 RECQL5O94762 991 aaPredicted RBP21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 KRT7P08729 469 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 MAN1A1P33908 653 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 HNF1BP35680 557 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 GALNT2Q10471 571 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 TARDBPQ13148 414 aaKnown RBP eCLIP21.56■■□□□ 1.044e-8■■■■■ 27.5
PPP4R1-228ENST00000584074 TBX2Q13207 712 aaPredicted RBP21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 PDK2Q15119 407 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 PRRT3Q5FWE3 981 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 FAXCQ5TGI0 409 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 DPPA4Q7L190 304 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 LRRC49Q8IUZ0 686 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 PHACTR4Q8IZ21 702 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 BBS5Q8N3I7 341 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 FAM181AQ8N9Y4 354 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 PDCD6IPQ8WUM4 868 aaKnown RBP21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 BTN2A2Q8WVV5 523 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 DUSP23Q9BVJ7 150 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 NT5MQ9NPB1 228 aa21.56■■□□□ 1.04
PPP4R1-228ENST00000584074 APOBEC3BQ9UH17 382 aaKnown RBP21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms