RNA–Protein interactions for RNA: ENST00000560777.5

RABGGTA-218, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5 BASIC

Gene RABGGTA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-218ENST00000560777 PHTF1Q9UMS5 762 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 CHKBQ9Y259 395 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 PPIL1Q9Y3C6 166 aa12.03□□□□□ -0.48
RABGGTA-218ENST00000560777 IGLON5A6NGN9 336 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 BCAT2O15382 392 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 SLC31A1O15431 190 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 KCNN4O15554 427 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 LIASO43766 372 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 MMP20O60882 483 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 PAK4O96013 591 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 MT-CYBP00156 380 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 GNSP15586 552 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 NFKB1P19838 968 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 DPP6P42658 865 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 FAM193AP78312 1265 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 IRX4P78413 519 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ELP6Q0PNE2 266 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 FGL2Q14314 439 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 PTPRRQ15256 657 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 CSRP2Q16527 193 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 DUOXA1Q1HG43 343 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ANKRD20A2Q5SQ80 823 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ANKRD20A1Q5TYW2 823 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ANKRD20A3Q5VUR7 823 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 KIAA1161Q6NSJ0 714 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ERAP2Q6P179 960 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 RASGEF1CQ8N431 466 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 ZCCHC9Q8N567 271 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 PAF1Q8N7H5 531 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 CEP76Q8TAP6 659 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 MS4A14Q96JA4 679 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 OSBPL9Q96SU4 736 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 TMEM121Q9BTD3 319 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 WRAP53Q9BUR4 548 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 C1QTNF2Q9BXJ5 285 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 TDRD1Q9BXT4 1180 aaKnown RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 SLC17A9Q9BYT1 436 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 FRMD8P1Q9BZ68 369 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 PCDH9Q9HC56 1237 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 TM9SF3Q9HD45 589 aa12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 KLHL8Q9P2G9 620 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 PTPRZ1P23471 2315 aaPredicted RBP12.02□□□□□ -0.49
RABGGTA-218ENST00000560777 RALGAPA1Q6GYQ0 2036 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TRPM6Q9BX84 2022 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 A0A1B0GTW7 788 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 C5orf60A6NFR6 353 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 A8MX80 341 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 KHNYNO15037 678 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 CPP00450 1065 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 PRLRP16471 622 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 NUDT1P36639 197 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 MMP12P39900 470 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 CSNK1EP49674 416 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 LIG3P49916 1009 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 GDF10P55107 478 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 RACK1P63244 317 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 RALGDSQ12967 914 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SF3A2Q15428 464 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 OASLQ15646 514 aaKnown RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 CCNG2Q16589 344 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 LONRF2Q1L5Z9 754 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SETMARQ53H47 684 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TRIM61Q5EBN2 209 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TCEAL6Q6IPX3 200 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 DPPA4Q7L190 304 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 FAM71DQ8N9W8 422 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 COG1Q8WTW3 980 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TCEAL3Q969E4 200 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SCRN2Q96FV2 425 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SERAC1Q96JX3 654 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SLC6A18Q96N87 628 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SMIM14Q96QK8 99 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 MCCC1Q96RQ3 725 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TRIB3Q96RU7 358 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 FERMT1Q9BQL6 677 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 CAPN10Q9HC96 672 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 UBP1Q9NZI7 540 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SUSD2Q9UGT4 822 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 TTC7AQ9ULT0 858 aaPredicted RBP12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SNX12Q9UMY4 172 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 SLC6A14Q9UN76 642 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 DMTF1Q9Y222 760 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 FAM186AA6NE01 2351 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 ZNF292O60281 2723 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 PI4KAP42356 2102 aa12.01□□□□□ -0.49
RABGGTA-218ENST00000560777 A0A0J9YYE9 177 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 A0A1W2PR77 199 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 CFAP69A5D8W1 941 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 PRR5-ARHGAP8B1AHC4 643 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 F5H423 210 aaPredicted RBP12□□□□□ -0.49
RABGGTA-218ENST00000560777 PRAMEF26H0Y7S4 382 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 FANCGO15287 622 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 PMPCBO75439 489 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 GCATO75600 419 aa12□□□□□ -0.49
RABGGTA-218ENST00000560777 ZNF189O75820 626 aaPredicted RBP12□□□□□ -0.49
RABGGTA-218ENST00000560777 STK10O94804 968 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms