RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 LRRC14Q15048 493 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 CT47A1Q5JQC4 288 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 KIAA1614Q5VZ46 1190 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ENPP7Q6UWV6 458 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 RBM44Q6ZP01 1051 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 CYP4V2Q6ZWL3 525 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 IRF2BP2Q7Z5L9 587 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ZSCAN30Q86W11 494 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ARHGAP12Q8IWW6 846 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 MCOLN2Q8IZK6 566 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 TSEN2Q8NCE0 465 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 NEK11Q8NG66 645 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 BTN2A2Q8WVV5 523 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ARHGEF26Q96DR7 871 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 PCMTD1Q96MG8 357 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 APOOQ9BUR5 198 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 FOXP3Q9BZS1 431 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 SYNDIG1Q9H7V2 258 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 MRPL40Q9NQ50 206 aaKnown RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 UBA2Q9UBT2 640 aaPredicted RBP11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 DAAM1Q9Y4D1 1078 aa11.65□□□□□ -0.54
PRPF40B-212ENST00000551111 ASH1LQ9NR48 2969 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 TMEM202A6NGA9 273 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 A8MX80 341 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 TMCO5BA8MYB1 307 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PYCARD-AS1I3L0S3 204 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PRAMEF11O60813 436 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 TNFSF15O95150 251 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PCCBP05166 539 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 MMP12P39900 470 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PAPOLAP51003 745 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 CFHR1Q03591 330 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 RAD51Q06609 339 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 RALGDSQ12967 914 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PTK2BQ14289 1009 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PTPRRQ15256 657 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PARP15Q460N3 678 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 FKBP15Q5T1M5 1219 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 ACAD10Q6JQN1 1059 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 IGF2-ASQ6U949 168 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 LSMEM2Q8N112 164 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 SDR16C5Q8N3Y7 309 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 NPWQ8N729 165 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 CCL4L1Q8NHW4 92 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 OR1E3Q8WZA6 343 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 TTC9Q92623 222 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 CCDC74AQ96AQ1 378 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PDXPQ96GD0 296 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 ERGIC2Q96RQ1 377 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 KCTD15Q96SI1 283 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 CNPY3Q9BT09 278 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 EDEM3Q9BZQ6 932 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 THSD1Q9NS62 852 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 PCSK1NQ9UHG2 260 aa11.64□□□□□ -0.55
PRPF40B-212ENST00000551111 LRRC10BA6NIK2 292 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 CTSEP14091 401 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 XPAP23025 273 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 RBMS1P29558 406 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 TMPRSS3P57727 454 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 TPI1P60174 286 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 SRP54P61011 504 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 CLN3Q13286 438 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 MAMLD1Q13495 774 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 NFATC4Q14934 902 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 TGIF1Q15583 401 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 AFMIDQ63HM1 303 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 E4F1Q66K89 784 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 CLEC17AQ6ZS10 378 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 TMPRSS9Q7Z410 1059 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 SRLQ86TD4 932 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 CASKIN2Q8WXE0 1202 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 TBATAQ96M53 351 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 NCAPGQ9BPX3 1015 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 SNRNP25Q9BV90 132 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 LGR4Q9BXB1 951 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 DHX35Q9H5Z1 703 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 CATSPERBQ9H7T0 1116 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 FGF22Q9HCT0 170 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 EVA1BQ9NVM1 165 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 ATXN7L1Q9ULK2 861 aaPredicted RBP11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 GPR34Q9UPC5 381 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 AP4E1Q9UPM8 1137 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 MYO18BQ8IUG5 2567 aa11.63□□□□□ -0.55
PRPF40B-212ENST00000551111 BSNQ9UPA5 3926 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 A0A0U1RQS6 177 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ERVH48-1M5A8F1 160 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 NOBOXO60393 691 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 TCEA3O75764 348 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 RECQL5O94762 991 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 FUCA1P04066 466 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 TCF4P15884 667 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ERCC2P18074 760 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 PEX5P50542 639 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 VAC14Q08AM6 782 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ELP6Q0PNE2 266 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 SPIDRQ14159 915 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 TAF1BQ53T94 588 aaPredicted RBP11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 BROXQ5VW32 411 aa11.62□□□□□ -0.55
PRPF40B-212ENST00000551111 ESRP1Q6NXG1 681 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms