RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 CCDC166P0CW27 439 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 GABRB3P28472 473 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 POLD2P49005 469 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 HCAR3P49019 387 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 RAB10P61026 200 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 RHDQ02161 417 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 GALNT2Q10471 571 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 PRPSAP1Q14558 356 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 MAPRE2Q15555 327 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 TSTD2Q5T7W7 516 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 PIWIL4Q7Z3Z4 852 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 CARM1Q86X55 608 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 SIX6OS1Q8N1H7 587 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 RNF169Q8NCN4 708 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 B3GALNT2Q8NCR0 500 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 ITFG2Q969R8 447 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 NXNL1Q96CM4 212 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 GPR78Q96P69 363 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 HNRNPABQ99729 332 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 FTHL17Q9BXU8 183 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 SEMA6AQ9H2E6 1030 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 TSPYL2Q9H2G4 693 aaPredicted RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 MRPL46Q9H2W6 279 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 GDAP2Q9NXN4 497 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 UBP1Q9NZI7 540 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 NCKIPSDQ9NZQ3 722 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 A0A1B0GTW7 788 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 STMN1P16949 149 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 NDUFV1P49821 464 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 SCAPQ12770 1279 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 TRAP1Q12931 704 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 HFE2Q6ZVN8 426 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 LINC00523Q86TU6 105 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 ERI1Q8IV48 349 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 NUP93Q8N1F7 819 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 SMG8Q8ND04 991 aaKnown RBP11.56□□□□□ -0.56
DDB1-224ENST00000545894 LRTOMTQ8WZ04 291 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 KCTD13Q8WZ19 329 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 TEKT5Q96M29 485 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 PCDHAC1Q9H158 963 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 GTSE1Q9NYZ3 720 aa11.56□□□□□ -0.56
DDB1-224ENST00000545894 A0A0J9YVX5 310 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 FAM95CA0A1B0GW59 222 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 HEATR9A2RTY3 570 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TRIM24O15164 1050 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 PSMD3O43242 534 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 RECQL4O94761 1208 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 CSPG5O95196 566 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 NPR3P17342 541 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 PNPLA4P41247 253 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 ALDH3B2P48448 385 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 CDK9P50750 372 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 FAM189BP81408 668 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SQLEQ14534 574 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 ZNF460Q14592 562 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TMEM240Q5SV17 173 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.564e-10■■■□□ 17.8
DDB1-224ENST00000545894 CHSY3Q70JA7 882 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 OTOP2Q7RTS6 562 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 PTAR1Q7Z6K3 402 aaPredicted RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 CEP97Q8IW35 865 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 CNTN4Q8IWV2 1026 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 RIN3Q8TB24 985 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 GFM2Q969S9 779 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 DUS3LQ96G46 650 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 OMDQ99983 421 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TMEM79Q9BSE2 394 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 RNF39Q9H2S5 420 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 WDR6Q9NNW5 1121 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 ANLNQ9NQW6 1124 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 PNPLA3Q9NST1 481 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 FAM105AQ9NUU6 356 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 CACNA2D2Q9NY47 1150 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SARDHQ9UL12 918 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 MYRFQ9Y2G1 1151 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 IPPQ9Y573 584 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 LTBP2Q14767 1821 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 H3BNH8 94 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 I6L893 689 aaPredicted RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 CLDN5O00501 218 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 HUS1O60921 280 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 BEST1O76090 585 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 JCHAINP01591 159 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 FGBP02675 491 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 SLC7A1P30825 629 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 TAF6P49848 677 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 KPNA2P52292 529 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 ADARP55265 1226 aaKnown RBP11.55□□□□□ -0.56
DDB1-224ENST00000545894 DNAJB13P59910 316 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 MPP1Q00013 466 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 LRP8Q14114 963 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 PCID2Q5JVF3 399 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 REP15Q6BDI9 236 aa11.55□□□□□ -0.56
DDB1-224ENST00000545894 KRT80Q6KB66 452 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms