RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 ZNF774Q6NX45 483 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 WDR73Q6P4I2 378 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 TRIM65Q6PJ69 517 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 GFRALQ6UXV0 394 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 HAPLN4Q86UW8 402 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 MON1AQ86VX9 555 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CDC20BQ86Y33 519 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 APLFQ8IW19 511 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 WDR63Q8IWG1 891 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 SFTPA2Q8IWL1 248 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ODF3L1Q8IXM7 274 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 C11orf53Q8IXP5 236 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 TCEAL8Q8IYN2 117 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 RNF113BQ8IZP6 322 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 MAGEB6Q8N7X4 407 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 STPG4Q8N801 248 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 DDHD1Q8NEL9 900 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 BBS10Q8TAM1 723 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 BRI3BPQ8WY22 251 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CPT1BQ92523 772 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 TM9SF4Q92544 642 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 RSC1A1Q92681 617 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ZNF566Q969W8 418 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 STAMBPL1Q96FJ0 436 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ST6GAL2Q96JF0 529 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ZNF354BQ96LW1 612 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 FOXN4Q96NZ1 517 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PIGSQ96S52 555 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 MCRIP2Q9BUT9 160 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 KATNAL1Q9BW62 490 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 BRINP2Q9C0B6 783 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 BRD8Q9H0E9 1235 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CXorf56Q9H5V9 222 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 ACAD9Q9H845 621 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 UPF2Q9HAU5 1272 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 PRDM8Q9NQV8 689 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 STARD7Q9NQZ5 370 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 INTS10Q9NVR2 710 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 ZNF624Q9P2J8 865 aaPredicted RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 NLKQ9UBE8 527 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 UPB1Q9UBR1 384 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 RASAL2Q9UJF2 1139 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 BAG5Q9UL15 447 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PADI1Q9ULC6 663 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 CDC14AQ9UNH5 594 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 NOP58Q9Y2X3 529 aaKnown RBP0.8□□□□□ -2.28
COPB1-212ENST00000534771 CEP83Q9Y592 693 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PCDHGB5Q9Y5G0 923 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 PSAT1Q9Y617 370 aa0.8□□□□□ -2.28
COPB1-212ENST00000534771 A0A087X002 238 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GOLGA6CA6NDK9 693 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GOLGA6BA6NDN3 693 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 PIP5K1BO14986 540 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 HNRNPRO43390 633 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 FGF18O76093 207 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 RGS11O94810 467 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 HEXIM1O94992 359 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 EDN1P05305 212 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CD48P09326 243 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 KRTAP1-4P0C5Y4 121 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GOLGA6DP0CG33 693 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ERVK-10P10266 1014 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CHN1P15882 459 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ACADSP16219 412 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 NPPBP16860 134 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CTPS1P17812 591 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GPTP24298 496 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 EEF1GP26641 437 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 HOXC8P31273 242 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 HNRNPH1P31943 449 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 TTKP33981 857 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CCR10P46092 362 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CENPAP49450 140 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 CDK7P50613 346 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 EFNA5P52803 228 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 TBL3Q12788 808 aaKnown RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 DCTN1Q14203 1278 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 NEDD9Q14511 834 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GRM3Q14832 879 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ARHGEF6Q15052 776 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 PTPROQ16827 1216 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 SOWAHAQ2M3V2 549 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 TRIM60Q495X7 471 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 TCTEX1D4Q5JR98 221 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 WDR38Q5JTN6 314 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 NXNQ6DKJ4 435 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 FAM53AQ6NSI3 398 aaPredicted RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 ZNF790Q6PG37 636 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 FAM198BQ6UWH4 519 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 RINLQ6ZS11 566 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 LRRTM1Q86UE6 522 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 BRSK2Q8IWQ3 736 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 FAM186BQ8IYM0 893 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 DSELQ8IZU8 1212 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 LINC00612Q8N6U2 182 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 BMPERQ8N8U9 685 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 GRHL3Q8TE85 626 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 ABTB1Q969K4 478 aaPredicted RBP0.79□□□□□ -2.28
COPB1-212ENST00000534771 KLHL29Q96CT2 875 aa0.79□□□□□ -2.28
COPB1-212ENST00000534771 SCRN2Q96FV2 425 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms