RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 BUB1BO60566 1050 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 ALPIP09923 528 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 C6P13671 934 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 TSHRP16473 764 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 ERCC2P18074 760 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 MIPP30301 263 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 MMP12P39900 470 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 RENBPP51606 427 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 HK3P52790 923 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 PCBP4P57723 403 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 GABREP78334 506 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 IL10RBQ08334 325 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 KLHL30Q0D2K2 578 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 CA9Q16790 459 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 WSCD2Q2TBF2 565 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 IGF2-ASQ6U949 168 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 ZNF571Q7Z3V5 609 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 CAMK1DQ8IU85 385 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 ARFGAP1Q8N6T3 406 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 KCTD15Q96SI1 283 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 CINPQ9BW66 212 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 TCEAL2Q9H3H9 227 aaPredicted RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 SP110Q9HB58 689 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 TMEM63CQ9P1W3 806 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 CNOT8Q9UFF9 292 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 DOLKQ9UPQ8 538 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 LOC400499M0QZD8 3231 aa20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 FASNP49327 2511 aaKnown RBP20.12■□□□□ 0.81
UBE2D3-220ENST00000505307 A0A1B0GTH6 734 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 YY2O15391 372 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 ATMINO43313 823 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 RASGRP1O95267 797 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 CTSEP14091 401 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 TGM2P21980 687 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 PCK1P35558 622 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 LIG3P49916 1009 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 BCL2L1Q07817 233 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 MTM1Q13496 603 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 C1orf61Q13536 156 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 NFATC4Q14934 902 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 PPP6R3Q5H9R7 873 aaPredicted RBP20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 TMCO4Q5TGY1 634 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 RBM44Q6ZP01 1051 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 ARHGAP12Q8IWW6 846 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 SLC35F3Q8IY50 421 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 TSEN2Q8NCE0 465 aaKnown RBP20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 ZNF599Q96NL3 588 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 PEBP4Q96S96 227 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 APOOQ9BUR5 198 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 CLPBQ9H078 707 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 ZWILCHQ9H900 591 aa20.11■□□□□ 0.81
UBE2D3-220ENST00000505307 BAHCC1Q9P281 2608 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 DFFAO00273 331 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 MUSKO15146 869 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 MPOP05164 745 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 ZNF165P49910 485 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 AP1S1P61966 158 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 INPP5AQ14642 412 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 BOLA3Q53S33 107 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 FIGNQ5HY92 759 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 HID1Q8IV36 788 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 ZNF653Q96CK0 615 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 ECHDC3Q96DC8 303 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 HIC2Q96JB3 615 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 LGMNQ99538 433 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 THSD1Q9NS62 852 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 SEPT3Q9UH03 358 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 PNMA8BQ9ULN7 279 aaPredicted RBP20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 PADI4Q9UM07 663 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 COQ6Q9Y2Z9 468 aa20.1■□□□□ 0.81
UBE2D3-220ENST00000505307 PTPRQQ9UMZ3 2332 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 A0A1W2PQ67 120 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 TK2O00142 265 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 DDX3XO00571 662 aaKnown RBP eCLIP20.09■□□□□ 0.812e-17■■■■□ 23.8
UBE2D3-220ENST00000505307 LRCH4O75427 683 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 TLE3Q04726 772 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 CCDC173Q0VFZ6 552 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 ENPP7Q6UWV6 458 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 CYP4V2Q6ZWL3 525 aaPredicted RBP20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 GKN2Q86XP6 184 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 SPACA3Q8IXA5 215 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 PAF1Q8N7H5 531 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 ARL10Q8N8L6 244 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 LSM14AQ8ND56 463 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 OR6C4Q8NGE1 309 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 SPOCK2Q92563 424 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 WDR92Q96MX6 357 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 PSKH2Q96QS6 385 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 ISCUQ9H1K1 167 aa20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 CWC15Q9P013 229 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 BZW2Q9Y6E2 419 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 SMG1Q96Q15 3661 aaKnown RBP20.09■□□□□ 0.81
UBE2D3-220ENST00000505307 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 H3BRJ5 948 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 HOXC4P09017 264 aaPredicted RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 KELP23276 732 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 RBMS1P29558 406 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 HSPA9P38646 679 aaKnown RBP20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 ARL4AP40617 200 aa20.08■□□□□ 0.81
UBE2D3-220ENST00000505307 MLLT3P42568 568 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms