RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ERVPABLB-1P60509 514 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 GRM3Q14832 879 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 PPP6R3Q5H9R7 873 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 C3orf38Q5JPI3 329 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 CCDC183Q5T5S1 534 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 BRAT1Q6PJG6 821 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 RBM44Q6ZP01 1051 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ARHGAP36Q6ZRI8 547 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 RFX8Q6ZV50 586 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ZNF571Q7Z3V5 609 aaPredicted RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ARHGAP12Q8IWW6 846 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 TP53INP2Q8IXH6 220 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 PLA2G15Q8NCC3 412 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 TBATAQ96M53 351 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 SLC46A1Q96NT5 459 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 CCDC3Q9BQI4 270 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 SNRNP25Q9BV90 132 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 EDEM3Q9BZQ6 932 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ASCL3Q9NQ33 180 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 MYO6Q9UM54 1294 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 ENTPD2Q9Y5L3 495 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 URB1O60287 2271 aaKnown RBP13.38□□□□□ -0.27
CPSF4-210ENST00000469897 APC2O95996 2303 aa13.38□□□□□ -0.27
CPSF4-210ENST00000469897 TTC24A2A3L6 582 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 PMS2P1A4D2B8 440 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ATXN7O15265 892 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 KLK10O43240 276 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 PRPSAP2O60256 369 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 RNF8O76064 485 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 RASGRP1O95267 797 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 TNFP01375 233 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 SKILP12757 684 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 SERPINA4P29622 427 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 SCNN1BP51168 640 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 SRP54P61011 504 aaKnown RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 BCL2L1Q07817 233 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 NSUN2Q08J23 767 aaKnown RBP eCLIP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ELOCQ15369 112 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ASIC2Q16515 512 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ANO6Q4KMQ2 910 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 AFMIDQ63HM1 303 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 KCTD16Q68DU8 428 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 PPP1R2P3Q6NXS1 205 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 FSTL5Q8N475 847 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 PAF1Q8N7H5 531 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 NAT6Q93015 286 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 PRR11Q96HE9 360 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 NSMCE3Q96MG7 304 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 TUBGCP5Q96RT8 1024 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 CINPQ9BW66 212 aaPredicted RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 NAT10Q9H0A0 1025 aaKnown RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ATP13A3Q9H7F0 1226 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 SYNDIG1Q9H7V2 258 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 AIPL1Q9NZN9 384 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 CWC15Q9P013 229 aaKnown RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 MYO1AQ9UBC5 1043 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 CNOT8Q9UFF9 292 aaKnown RBP13.37□□□□□ -0.27
CPSF4-210ENST00000469897 GPR34Q9UPC5 381 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ATP8A1Q9Y2Q0 1164 aa13.37□□□□□ -0.27
CPSF4-210ENST00000469897 ATRXP46100 2492 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 SMTNL1A8MU46 457 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 EIF3CLB5ME19 914 aaKnown RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 DDX3XO00571 662 aaKnown RBP eCLIP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 RECQL5O94762 991 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 ALPIP09923 528 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 MMP12P39900 470 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 POLR2LP62875 67 aaKnown RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 IL10RBQ08334 325 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 C19orf57Q0VDD7 668 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 NFATC4Q14934 902 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 AGERQ15109 404 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 BROXQ5VW32 411 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 E4F1Q66K89 784 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 LVRNQ6Q4G3 990 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 CYP4V2Q6ZWL3 525 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 NPWQ8N729 165 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 ARL10Q8N8L6 244 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 KCNE4Q8WWG9 221 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 GRAMD1AQ96CP6 724 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 NAP1L5Q96NT1 182 aaPredicted RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 EIF3CQ99613 913 aaKnown RBP13.36□□□□□ -0.27
CPSF4-210ENST00000469897 SP110Q9HB58 689 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 THSD1Q9NS62 852 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 RABGEF1Q9UJ41 708 aa13.36□□□□□ -0.27
CPSF4-210ENST00000469897 TEX51A0A1B0GUA7 166 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 TMEM202A6NGA9 273 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 TK2O00142 265 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 TRAFD1O14545 582 aaPredicted RBP13.35□□□□□ -0.27
CPSF4-210ENST00000469897 LRCH4O75427 683 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 TCEA3O75764 348 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 MBD3O95983 291 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 GZMAP12544 262 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 AMPD1P23109 780 aa13.35□□□□□ -0.27
CPSF4-210ENST00000469897 HCAR3P49019 387 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms