RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PI15O43692 258 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPAG6O75602 509 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TMEM63AO94886 807 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SEMA3DO95025 777 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 GCNT3O95395 438 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZBED1O96006 694 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LTFP02788 710 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ITGAVP06756 1048 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 HSMCR30P0CW71 290 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CKMT1AP12532 417 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRG2P13727 222 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 VEGFAP15692 232 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CPN2P22792 545 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCNE1P24864 410 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PPP2R1AP30153 589 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SHMT1P34896 483 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAGLN2P37802 199 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ECI1P42126 302 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAGEA11P43364 429 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ALDH1A3P47895 512 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 KCNJ5P48544 419 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCT3P49368 545 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARHGDIAP52565 204 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 RNASE9P60153 205 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LACTBP83111 547 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAP1Q03518 808 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LMAN2Q12907 356 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 STK4Q13043 487 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CALCOCO2Q13137 446 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 FADDQ13158 208 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LSAMPQ13449 338 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LPIN1Q14693 890 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SMAD1Q15797 465 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CHRNA2Q15822 529 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC142Q17RM4 750 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRSS53Q2L4Q9 553 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 FLYWCH1Q4VC44 716 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 RARS2Q5T160 578 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 C6orf163Q5TEZ5 329 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ANKRD20A3Q5VUR7 823 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 METTL21CQ5VZV1 264 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 AFMIDQ63HM1 303 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 HAUS3Q68CZ6 603 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 DUPD1Q68J44 220 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 KRT40Q6A162 431 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF425Q6IV72 752 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TCTN3Q6NUS6 607 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 BLOC1S2Q6QNY1 142 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 METAP1DQ6UB28 335 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CACNA2D4Q7Z3S7 1137 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CHD1LQ86WJ1 897 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PLA2G4DQ86XP0 818 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SCUBE1Q8IWY4 988 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LINC00518Q8N0U6 118 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC43A2Q8N370 569 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 FBXW8Q8N3Y1 598 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TBC1D19Q8N5T2 526 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 OR2C3Q8N628 320 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ARFGAP1Q8N6T3 406 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CNNM3Q8NE01 707 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 MCPH1Q8NEM0 835 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SPATA20Q8TB22 786 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 METTL6Q8TCB7 284 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 COG1Q8WTW3 980 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PDCD6IPQ8WUM4 868 aaKnown RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 LEO1Q8WVC0 666 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 TRAPPC12Q8WVT3 735 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 SLC44A1Q8WWI5 657 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PPP1R14AQ96A00 147 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 AZIN2Q96A70 460 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 ZNF503Q96F45 646 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 HMCESQ96FZ2 354 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 FCRL4Q96PJ5 515 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 AGAP2Q99490 1192 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 RAD9AQ99638 391 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CCDC28BQ9BUN5 200 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 MIS12Q9H081 205 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CUEDC2Q9H467 287 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 COPS7BQ9H9Q2 264 aaPredicted RBP4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 C17orf75Q9HAS0 396 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 IL26Q9NPH9 171 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 FAIMQ9NVQ4 179 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 COQ3Q9NZJ6 369 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 COPG2Q9UBF2 871 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 GRHPRQ9UBQ7 328 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 CDC23Q9UJX2 597 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PADI4Q9UM07 663 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 NAALADL1Q9UQQ1 740 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PPIL1Q9Y3C6 166 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 PCDHA2Q9Y5H9 948 aa4.8□□□□□ -1.64
HMGB3P9-201ENST00000441799 UNC13BO14795 1591 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 MAST1Q9Y2H9 1570 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 AFF2P51816 1311 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 UBN2Q6ZU65 1347 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 IGSF1Q8N6C5 1336 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 PRDM15P57071 1507 aaPredicted RBP4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 SYCP2Q9BX26 1530 aa4.79□□□□□ -1.64
HMGB3P9-201ENST00000441799 A0A0J9YVX5 310 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms