RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 CSNK1DP48730 415 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 NSUN2Q08J23 767 aaKnown RBP eCLIP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 PDIA2Q13087 525 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 UAP1Q16222 522 aaPredicted RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 FSTL4Q6MZW2 842 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 KDELC1Q6UW63 502 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 PDZD3Q86UT5 571 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CCNJLQ8IV13 435 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 ETFBKMTQ8IXQ9 262 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 APCDD1Q8J025 514 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 ARRDC2Q8TBH0 407 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 TTC17Q96AE7 1141 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 GDAP1L1Q96MZ0 367 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 NUDCD1Q96RS6 583 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 NAT9Q9BTE0 207 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 ECT2Q9H8V3 914 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 SAYSD1Q9NPB0 183 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 CASS4Q9NQ75 786 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 INTS6Q9UL03 887 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 HS3ST2Q9Y278 367 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 NEUROG3Q9Y4Z2 214 aa11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 MYO18AQ92614 2054 aaKnown RBP11.85□□□□□ -0.51
AC009404.1-202ENST00000439955 RIPK2O43353 540 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 RNF40O75150 1001 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 EGFP01133 1207 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ASLP04424 464 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ARSAP15289 507 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ADRA1AP35348 466 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 MAPK8P45983 427 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 DGKGP49619 791 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 EIF3BP55884 814 aaKnown RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ITKQ08881 620 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 NIPAL4Q0D2K0 466 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 CDH17Q12864 832 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 CYTH1Q15438 398 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ITPRIPL2Q3MIP1 535 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 FUT11Q495W5 492 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 FNBP1LQ5T0N5 605 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 DENND2CQ68D51 928 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 NAIF1Q69YI7 327 aaPredicted RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 TRIM68Q6AZZ1 485 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 LRIG3Q6UXM1 1119 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 MTERF4Q7Z6M4 381 aaKnown RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 CROCCP2Q86T23 111 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 PRPF39Q86UA1 669 aaKnown RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ZBED8Q8IZ13 594 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 IQCKQ8N0W5 287 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ISG20Q96AZ6 181 aaKnown RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 PWWP2AQ96N64 755 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 CEP44Q9C0F1 390 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 EPB41L4BQ9H329 900 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 ARNT2Q9HBZ2 717 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 FBRSL1Q9HCM7 1045 aaKnown RBP11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 HPS4Q9NQG7 708 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 NINJ2Q9NZG7 142 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 LHX3Q9UBR4 397 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 SLC25A13Q9UJS0 675 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 MSRB2Q9Y3D2 182 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 TEX264Q9Y6I9 313 aa11.84□□□□□ -0.51
AC009404.1-202ENST00000439955 SDR42E2A6NKP2 422 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MUSKO15146 869 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 ATG13O75143 517 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SASH3O75995 380 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 EPOP01588 193 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MMP2P08253 660 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SERPINF2P08697 491 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 CISD3P0C7P0 127 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 CD86P42081 329 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 NPY2RP49146 381 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MAXP61244 160 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 AP1S1P61966 158 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 IRX4P78413 519 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SIM1P81133 766 aaPredicted RBP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SKOR1P84550 965 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 DSC2Q02487 901 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 GRSF1Q12849 480 aaKnown RBP eCLIP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 RUNX3Q13761 415 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 EIF4HQ15056 248 aaKnown RBP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 COL28A1Q2UY09 1125 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 GAB4Q2WGN9 574 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 BBS9Q3SYG4 887 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 PREPLQ4J6C6 727 aaPredicted RBP11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MSS51Q4VC12 460 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 TMEM196Q5HYL7 178 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 RANBP10Q6VN20 620 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 LEKR1Q6ZMV7 388 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 ADIPOR2Q86V24 386 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 IPMKQ8NFU5 416 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SPATA22Q8NHS9 363 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 PYROXD1Q8WU10 500 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 CHFRQ96EP1 664 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 FEM1CQ96JP0 617 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 MRGPRX2Q96LB1 330 aa11.83□□□□□ -0.52
AC009404.1-202ENST00000439955 SIGLEC10Q96LC7 697 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms