RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 PCDH15Q96QU1 1955 aa14.49□□□□□ -0.09
CSTF3-202ENST00000431742 ZNF292O60281 2723 aa14.49□□□□□ -0.09
CSTF3-202ENST00000431742 METTL12A8MUP2 240 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 RIOK3O14730 519 aaKnown RBP14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TSPAN6O43657 245 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 EPN2O95208 641 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 PSMB4P28070 264 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 POLR2LP62875 67 aaKnown RBP14.48□□□□□ -0.09
CSTF3-202ENST00000431742 ELP6Q0PNE2 266 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TMEM52BQ4KMG9 183 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TMEM259Q4ZIN3 620 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 PEAR1Q5VY43 1037 aaPredicted RBP14.48□□□□□ -0.09
CSTF3-202ENST00000431742 LAIR1Q6GTX8 287 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TTC27Q6P3X3 843 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TTC7BQ86TV6 843 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 PDCD6IPQ8WUM4 868 aaKnown RBP14.48□□□□□ -0.09
CSTF3-202ENST00000431742 DNASE2BQ8WZ79 361 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 FOXJ1Q92949 421 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 BIRC7Q96CA5 298 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 HSPA12BQ96MM6 686 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 ORAI3Q9BRQ5 295 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 AP1M1Q9BXS5 423 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 PCDH9Q9HC56 1237 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 FAM153AQ9UHL3 310 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TPX2Q9ULW0 747 aaKnown RBP14.48□□□□□ -0.09
CSTF3-202ENST00000431742 PHTF1Q9UMS5 762 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 CHKBQ9Y259 395 aa14.48□□□□□ -0.09
CSTF3-202ENST00000431742 TMEM131Q92545 1883 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 FAM47DPA6NHR8 397 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 PDE2AO00408 941 aaPredicted RBP14.47□□□□□ -0.09
CSTF3-202ENST00000431742 RNGTTO60942 597 aaKnown RBP14.47□□□□□ -0.09
CSTF3-202ENST00000431742 PHF2O75151 1096 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 PRKCGP05129 697 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ITIH2P19823 946 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 DHPSP49366 369 aaPredicted RBP14.47□□□□□ -0.09
CSTF3-202ENST00000431742 RALGDSQ12967 914 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 MPP3Q13368 585 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 LPAL2Q16609 132 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 LYSMD4Q5XG99 296 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 KIAA1161Q6NSJ0 714 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ARHGEF18Q6ZSZ5 1173 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 DPPA4Q7L190 304 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ARMCX6Q7L4S7 300 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ZSCAN30Q86W11 494 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 HORMAD1Q86X24 394 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 DEFB119Q8N690 84 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 GLIS1Q8NBF1 620 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 FEM1CQ96JP0 617 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 CAPZA3Q96KX2 299 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 MRGPRX2Q96LB1 330 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 PPP1R2P1Q96PQ5 205 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 PHOX2BQ99453 314 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 MLPHQ9BV36 600 aaPredicted RBP14.47□□□□□ -0.09
CSTF3-202ENST00000431742 RNF14Q9UBS8 474 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 RAB23Q9ULC3 237 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ZFR2Q9UPR6 939 aaKnown RBP14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ADAMTS9Q9P2N4 1935 aa14.47□□□□□ -0.09
CSTF3-202ENST00000431742 ZFHX2Q9C0A1 2572 aaPredicted RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3DA0A087WVF3 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3IA0A087WXS9 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3EA0A087X179 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3KA0A087X1G2 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 A0A0J9YYE9 177 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 GOLGA6L10A0A0M3HER8 536 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 LOC285095A0A1B0GVY8 99 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 A0A1W2PQU0 124 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3FA6NER0 549 aaPredicted RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 PRR23AA6NEV1 266 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3LB9A6J9 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 F5H423 210 aaPredicted RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 PMPCBO75439 489 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 ANXA9O76027 345 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 METTL18O95568 372 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 EPOP01588 193 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TRBC1P01850 177 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 LMNAP02545 664 aaKnown RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TUBB4AP04350 444 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3HP0C7X1 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 XPAP23025 273 aaPredicted RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 KCNJ1P48048 391 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 GRIA4P48058 902 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 WNT3AP56704 352 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 CDK18Q07002 472 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 QPCTQ16769 361 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 PARP6Q2NL67 630 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 ZNF284Q2VY69 593 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 SEL1L3Q68CR1 1132 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3GQ6DHY5 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3CQ6IPX1 549 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 ERAP2Q6P179 960 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 TBC1D3Q8IZP1 549 aaPredicted RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 LPCAT1Q8NF37 534 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 C1orf216Q8TAB5 229 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 MAGOHBQ96A72 148 aaKnown RBP14.46□□□□□ -0.09
CSTF3-202ENST00000431742 SCRN2Q96FV2 425 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 LYSMD1Q96S90 227 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 EBF2Q9HAK2 575 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 UBP1Q9NZI7 540 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 B4GALT6Q9UBX8 382 aa14.46□□□□□ -0.09
CSTF3-202ENST00000431742 PCDHGA5Q9Y5G8 931 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms